RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SMPDL3BQ92485 455 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 CACNG6Q9BXT2 260 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 TINAGL1Q9GZM7 467 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 FN3KQ9H479 309 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 PCDHB16Q9NRJ7 776 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 EYSQ5T1H1 3165 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 P2RX6O15547 441 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 HOXB1P14653 301 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 NT5EP21589 574 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 RUNX2Q13950 521 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 GXYLT1Q4G148 440 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 COX18Q8N8Q8 333 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 SRFBP1Q8NEF9 429 aaKnown RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 RAB7BQ96AH8 199 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 INTS12Q96CB8 462 aaKnown RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 C10orf90Q96M02 699 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 DPCDQ9BVM2 203 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 ANKRD19PQ9H560 264 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 FGF22Q9HCT0 170 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 TBC1D29Q9UFV1 150 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 STON1Q9Y6Q2 735 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 A0A1W2PQU0 124 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 TRIM3O75382 744 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 KAT7O95251 611 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 TCRBP04435 133 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 STOMP27105 288 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 VASPP50552 380 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 SRSF5Q13243 272 aaKnown RBP17.87■□□□□ 0.45
CAPN1-226ENST00000533820 PRAMEF8Q5VWM4 474 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 PRAMEF7Q5VXH5 474 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 LIX1LQ8IVB5 337 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 SLC44A3Q8N4M1 653 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 OR5T3Q8NGG3 340 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 HMGB4Q8WW32 186 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 FGF13Q92913 245 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 TNFRSF13CQ96RJ3 184 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 ING4Q9UNL4 249 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 TMEM5Q9Y2B1 443 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 YKT6O15498 198 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 PRICKLE3O43900 615 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-226ENST00000533820 SOX30O94993 753 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 TUSC1Q2TAM9 212 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 SFRP4Q6FHJ7 346 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-226ENST00000533820 CHMP1BQ7LBR1 199 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 GPAT4Q86UL3 456 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 MFSD9Q8NBP5 474 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 OR4C6Q8NH72 309 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF559Q9BR84 538 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 CERS4Q9HA82 394 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 FOLH1BQ9HBA9 442 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 MRPS2Q9Y399 296 aaKnown RBP17.86■□□□□ 0.45
CAPN1-226ENST00000533820 ARHGEF17Q96PE2 2063 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-226ENST00000533820 GXYLT2A0PJZ3 443 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 LRRN3E7EW58 273 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 H0YC42 278 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 SSX5O60225 188 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 SBK2P0C263 348 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 ATF1P18846 271 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 NPR2P20594 1047 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 EEF1A1P68104 462 aaKnown RBP17.86■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF85Q03923 595 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 PDGFRLQ15198 375 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 SDR9C7Q8NEX9 313 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 OR4K13Q8NH42 304 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 OR51J1Q9H342 316 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 DPAGT1Q9H3H5 408 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 LRRN3Q9H3W5 708 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 AUNIPQ9H7T9 357 aa17.86■□□□□ 0.45
CAPN1-226ENST00000533820 KRCC1Q9NPI7 259 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-226ENST00000533820 MEPEQ9NQ76 525 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-226ENST00000533820 A0A0G2JK05 382 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 RIIAD1A6NNX1 92 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 IMPA2O14732 288 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 GMDSO60547 372 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ANKRD34CP0C6C1 535 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 RAB3BP20337 219 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 GRPRP30550 384 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 PSMB10P40306 273 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 SLC36A2Q495M3 483 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 DCST2Q5T1A1 773 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 HEPHL1Q6MZM0 1159 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 SERPINA12Q8IW75 414 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 CDK20Q8IZL9 346 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF671Q8TAW3 534 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 HPF1Q9NWY4 346 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 H3BSH0 61 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 PVRP15151 417 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 BMP8BP34820 402 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 TANGO2Q6ICL3 276 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 BMP8AQ7Z5Y6 402 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ASPGQ86U10 573 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF687Q8N1G0 1237 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 OR6M1Q8NGM8 313 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 RBPMSQ93062 196 aaKnown RBP17.85■□□□□ 0.45
CAPN1-226ENST00000533820 PDCD1LG2Q9BQ51 273 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 IL21RQ9HBE5 538 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF223Q9UK11 482 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-226ENST00000533820 FLVCR2Q9UPI3 526 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 PRELID3BQ9Y3B1 194 aa17.85■□□□□ 0.45
CAPN1-226ENST00000533820 MYO15AQ9UKN7 3530 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms