RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ZNF23P17027 643 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 DDX5P17844 614 aaKnown RBP11.39□□□□□ -0.59
COPB1-209ENST00000533096 PGCP20142 388 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 MATN1P21941 496 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 PRPH2P23942 346 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 CFPP27918 469 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 SOAT1P35610 550 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 HPCAL1P37235 193 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 SLC25A3Q00325 362 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 PDK3Q15120 406 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 SWI5Q1ZZU3 235 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 LSM12Q3MHD2 195 aaKnown RBP11.39□□□□□ -0.59
COPB1-209ENST00000533096 HIKESHIQ53FT3 197 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 TSPO2Q5TGU0 170 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 KLHL24Q6TFL4 600 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 EIF3MQ7L2H7 374 aaKnown RBP11.39□□□□□ -0.59
COPB1-209ENST00000533096 ZNF572Q7Z3I7 529 aaPredicted RBP11.39□□□□□ -0.59
COPB1-209ENST00000533096 RFLNBQ8N5W9 214 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.39□□□□□ -0.59
COPB1-209ENST00000533096 ACMSDQ8TDX5 336 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 ST8SIA1Q92185 356 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 MTERF3Q96E29 417 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 ZNF764Q96H86 408 aaPredicted RBP11.39□□□□□ -0.59
COPB1-209ENST00000533096 KCNS3Q9BQ31 491 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 BPESC1Q9GZL8 116 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 GPATCH2Q9NW75 528 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 PARPBPQ9NWS1 579 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 ATP6V1HQ9UI12 483 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 KCNE5Q9UJ90 142 aa11.39□□□□□ -0.59
COPB1-209ENST00000533096 CENPVL1A0A0U1RR11 272 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 SCAMP2O15127 329 aaKnown RBP11.38□□□□□ -0.59
COPB1-209ENST00000533096 STX11O75558 287 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 RGS9O75916 674 aaPredicted RBP11.38□□□□□ -0.59
COPB1-209ENST00000533096 KRT33AO76009 404 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 PROCP04070 461 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 APOBEC1P41238 236 aaKnown RBP11.38□□□□□ -0.59
COPB1-209ENST00000533096 CCT5P48643 541 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 DNAJB13P59910 316 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 NAA20P61599 178 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 TGFBR3Q03167 851 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 SKP2Q13309 424 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 PGS1Q32NB8 556 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 C6orf120Q7Z4R8 191 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 ZCCHC24Q8N2G6 241 aaKnown RBP11.38□□□□□ -0.59
COPB1-209ENST00000533096 KRTCAP2Q8N6L1 136 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 NOA1Q8NC60 698 aaKnown RBP11.38□□□□□ -0.59
COPB1-209ENST00000533096 ZNF540Q8NDQ6 660 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 PIGXQ8TBF5 258 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 AGR3Q8TD06 166 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 ANP32BQ92688 251 aaKnown RBP11.38□□□□□ -0.59
COPB1-209ENST00000533096 FCRL1Q96LA6 429 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 C1orf50Q9BV19 199 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 OXSMQ9NWU1 459 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 DNAJC15Q9Y5T4 150 aa11.38□□□□□ -0.59
COPB1-209ENST00000533096 SPIN1Q9Y657 262 aaPredicted RBP11.38□□□□□ -0.59
COPB1-209ENST00000533096 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
COPB1-209ENST00000533096 TMEM114B3SHH9 223 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 TMEM233B4DJY2 109 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 LSM1O15116 133 aaKnown RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 GLRA3O75311 464 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 UGT2B17O75795 530 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 WNT11O96014 354 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 OR4A8P0C604 315 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 APEX1P27695 318 aaKnown RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 ECHS1P30084 290 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 IL2RGP31785 369 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 IDH2P48735 452 aaKnown RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 ABLIM2Q6H8Q1 611 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 C16orf62Q7Z3J2 963 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 ADGRG3Q86Y34 549 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 C10orf107Q8IVU9 208 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 SLC25A43Q8WUT9 341 aaPredicted RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 XAGE5Q8WWM1 108 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 AURKBQ96GD4 344 aaPredicted RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 SNX18Q96RF0 628 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 PRPF18Q99633 342 aaKnown RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 NAA11Q9BSU3 229 aaPredicted RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 BHLHE41Q9C0J9 482 aaPredicted RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 TMEM181Q9P2C4 612 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 PSMC3IPQ9P2W1 217 aaPredicted RBP11.37□□□□□ -0.59
COPB1-209ENST00000533096 MALT1Q9UDY8 824 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 CHRNA9Q9UGM1 479 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 TMED5Q9Y3A6 229 aa11.37□□□□□ -0.59
COPB1-209ENST00000533096 SMIM23A6NLE4 172 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 PIP5K1BO14986 540 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 RIPK2O43353 540 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 PLIN3O60664 434 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 BCAS1O75363 584 aaPredicted RBP11.36□□□□□ -0.59
COPB1-209ENST00000533096 STAMBPO95630 424 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 PMS2P2O95744 297 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 CRYAAP02489 173 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 NEFHP12036 1026 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 DAOP14920 347 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 RPL3P39023 403 aaKnown RBP11.36□□□□□ -0.59
COPB1-209ENST00000533096 CHN2P52757 468 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 TUBA1BP68363 451 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 TUBA4AP68366 448 aa11.36□□□□□ -0.59
COPB1-209ENST00000533096 PTGR1Q14914 329 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms