RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 UBDO15205 165 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 POLR3GO15318 223 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNHIT1O43257 154 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TSPAN2O60636 221 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 HCN1O60741 890 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ICOSLGO75144 302 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TRAPPC6AO75865 159 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 NKX2-2O95096 273 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 LDLRP01130 860 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 IGHG3P01860 377 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 HMGN2P05204 90 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TPOP07202 933 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 KRT16P08779 473 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ALOX5P09917 674 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ALDOCP09972 364 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CYP4B1P13584 511 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 IDO1P14902 403 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 GDF1P27539 372 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 S100A3P33764 101 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 SOAT1P35610 550 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CA7P43166 264 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 PCP4P48539 62 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CLK3P49761 638 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 HBA1P69905 142 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TP53BP2Q13625 1128 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 C3AR1Q16581 482 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 DUSP5Q16690 384 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 GSTA3Q16772 222 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 FAM174BQ3ZCQ3 159 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC9B1Q4ZJI4 515 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 HSP90B2PQ58FF3 399 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 NHSL2Q5HYW2 709 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 SPANXN4Q5MJ08 99 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TIGD3Q6B0B8 471 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TMEM81Q6P7N7 255 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 EPGNQ6UW88 154 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANGPTL8Q6UXH0 198 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 Q6ZPB1 254 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TRILQ7L0X0 811 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 MAVSQ7Z434 540 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 FJX1Q86VR8 437 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANKRD46Q86W74 232 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 DOLPP1Q86YN1 238 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 LINC00346Q8IVM7 164 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CHERPQ8IWX8 916 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 PEX5LQ8IYB4 626 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CLECL1Q8IZS7 167 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC16A11Q8NCK7 471 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR8J2Q8NGG1 315 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR56A1Q8NGH5 318 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR4A15Q8NGL6 344 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR1J4Q8NGS1 313 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR5AK3PQ8NH89 298 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 FAM57AQ8TBR7 257 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CKAP2Q8WWK9 683 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 PIK3R3Q92569 461 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 MOAP1Q96BY2 351 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 SARAFQ96BY9 339 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 GIMAP5Q96F15 307 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OTUB1Q96FW1 271 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 PERPQ96FX8 193 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CHMP6Q96FZ7 201 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 RMND5BQ96G75 393 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 C16orf58Q96GQ5 468 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 REXO5Q96IC2 774 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 MARK4Q96L34 752 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 MAGEB18Q96M61 343 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 GNRHR2Q96P88 292 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR52B2Q96RD2 323 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 CXorf36Q9H7Y0 433 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 GALNT9Q9HCQ5 603 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ACKR4Q9NPB9 350 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 DLL4Q9NR61 685 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 QPCTLQ9NXS2 382 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TAS2R3Q9NYW6 316 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TINAGQ9UJW2 476 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OSGIN1Q9UJX0 560 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 C15orf41Q9Y2V0 281 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 LIPGQ9Y5X9 500 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 GCN1Q92616 2671 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 HELZ2Q9BYK8 2649 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 C15orf38-AP3S2A0A0A6YYH1 394 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 A0A0G2JNJ9 132 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 GXYLT2A0PJZ3 443 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 WIPF3A6NGB9 483 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 A8MZ25 164 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 C9JVG2 144 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 BCKDKO14874 412 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 SCO2O43819 266 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZG16O60844 167 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 SCN2BO60939 215 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 CBR3O75828 277 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 SOX30O94993 753 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 KCNK2O95069 426 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR2C1O95371 312 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 UTS2O95399 124 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 CPSF4O95639 269 aaKnown RBP5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 IGKV1D-16P01601 117 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 OPN1MWP04001 364 aa5.24□□□□□ -1.57
HMGB1P42-201ENST00000532126 IL6P05231 212 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms