RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 HDGFL3Q9Y3E1 203 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 MAGED1Q9Y5V3 778 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-207ENST00000531727 CLDN24A6NM45 220 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 ZNF716A6NP11 495 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 SDHDO14521 159 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 PGM3O95394 542 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 NME5P56597 212 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 UFM1P61960 85 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 BST1Q10588 318 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 ETFDHQ16134 617 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 PGGHGQ32M88 737 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 CEP85LQ5SZL2 805 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 FBXW9Q5XUX1 488 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 SPATA19Q7Z5L4 167 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 RNF130Q86XS8 419 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 ADGRG3Q86Y34 549 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 TRIML2Q8N7C3 387 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 ZNF433Q8N7K0 673 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-207ENST00000531727 PIGXQ8TBF5 258 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 GTPBP3Q969Y2 492 aaKnown RBP14.86□□□□□ -0.03
CPSF1-207ENST00000531727 ARL5BQ96KC2 179 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 TRNT1Q96Q11 434 aaKnown RBP14.86□□□□□ -0.03
CPSF1-207ENST00000531727 PANX1Q96RD7 426 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 SLC38A1Q9H2H9 487 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 AIG1Q9NVV5 245 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 LIPT1Q9Y234 373 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 NOSIPQ9Y314 301 aaKnown RBP14.86□□□□□ -0.03
CPSF1-207ENST00000531727 FN1P02751 2386 aaKnown RBP14.86□□□□□ -0.03
CPSF1-207ENST00000531727 ROS1P08922 2347 aa14.86□□□□□ -0.03
CPSF1-207ENST00000531727 CCDC154A6NI56 674 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 OR5H1A6NKK0 313 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 INAFM1C9JVW0 142 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 GPR171O14626 319 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 ADAM11O75078 769 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 IDUAP35475 653 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 CDKN1AP38936 164 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 HTR3AP46098 478 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 IDH2P48735 452 aaKnown RBP14.85□□□□□ -0.03
CPSF1-207ENST00000531727 ANXA11P50995 505 aaKnown RBP14.85□□□□□ -0.03
CPSF1-207ENST00000531727 SLC16A1P53985 500 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 TXNL4AP83876 142 aaKnown RBP14.85□□□□□ -0.03
CPSF1-207ENST00000531727 PPP2R2BQ00005 443 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 SYPL1Q16563 259 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 CLEC12BQ2HXU8 276 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 CMIPQ8IY22 773 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 UBE2J2Q8N2K1 259 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 ANKFN1Q8N957 763 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 CNOT9Q92600 299 aaKnown RBP14.85□□□□□ -0.03
CPSF1-207ENST00000531727 APH1AQ96BI3 265 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 DNAJA3Q96EY1 480 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 PAIP2Q9BPZ3 127 aaKnown RBP14.85□□□□□ -0.03
CPSF1-207ENST00000531727 INPP5KQ9BT40 448 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 OR11A1Q9GZK7 315 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 NPAP1Q9NZP6 1156 aa14.85□□□□□ -0.03
CPSF1-207ENST00000531727 ZANQ9Y493 2812 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 ABCA2Q9BZC7 2435 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 GOLGA8QA0A0J9YX86 632 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 GOLGA8OA6NCC3 632 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 AGAP5A6NIR3 686 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 SHISA9B4DS77 424 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 GOLGA8NF8WBI6 632 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 AP3D1O14617 1153 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 RAMP1O60894 148 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 IGHV3-9P01782 118 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 PGRP06401 933 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 THBS1P07996 1170 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 CHRM4P08173 479 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 IL12AP29459 219 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 CDKN2CP42773 168 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 OR2B6P58173 313 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 LRRC74AQ0VAA2 488 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 VEZF1Q14119 521 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 HHATQ5VTY9 493 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 LRRC74BQ6ZQY2 392 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 CROCCP2Q86T23 111 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 PRIMA1Q86XR5 153 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 WDR60Q8WVS4 1066 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 ZBTB9Q96C00 473 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 OR52E6Q96RD3 313 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 GRIP2Q9C0E4 1043 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 CISD1Q9NZ45 108 aaKnown RBP14.84□□□□□ -0.03
CPSF1-207ENST00000531727 TMEM181Q9P2C4 612 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 RAB21Q9UL25 225 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 TRAPPC4Q9Y296 219 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 GPR45Q9Y5Y3 372 aa14.84□□□□□ -0.03
CPSF1-207ENST00000531727 USF3Q68DE3 2245 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 TMED7-TICAM2A0A0A6YYA0 188 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 RNF223E7ERA6 249 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 FAAHO00519 579 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 ABCD4O14678 606 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 RAD51DO75771 328 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 CCNA2P20248 432 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 RPS4Y1P22090 263 aaKnown RBP14.83□□□□□ -0.04
CPSF1-207ENST00000531727 NTF4P34130 210 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 MAGEA8P43361 318 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 POLR2HP52434 150 aaKnown RBP14.83□□□□□ -0.04
CPSF1-207ENST00000531727 CDH11P55287 796 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 FAPQ12884 760 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 GNA13Q14344 377 aa14.83□□□□□ -0.04
CPSF1-207ENST00000531727 ZNF621Q6ZSS3 439 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms