RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, human

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP33-217	ENST00000531637	HMGB2	P26583	209 aa	Known RBP	4.2	□□□□□ -1.74
USP33-217	ENST00000531637	OGDH	Q02218	1023 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	CCDC173	Q0VFZ6	552 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	KLRB1	Q12918	225 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	KIAA0040	Q15053	153 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	AANAT	Q16613	207 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	CTSL3P	Q5NE16	218 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	C1orf220	Q5T0J3	134 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	PDZK1	Q5T2W1	519 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	PPP1R27	Q86WC6	154 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	C17orf82	Q86X59	251 aa	Predicted RBP	4.2	□□□□□ -1.74
USP33-217	ENST00000531637	OR8J1	Q8NGP2	316 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	SCFD1	Q8WVM8	642 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	UBE2E3	Q969T4	207 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	CXorf40B	Q96DE9	158 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	SLC38A2	Q96QD8	506 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	CNPY3	Q9BT09	278 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	NMUR2	Q9GZQ4	415 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637		Q9H3A6	140 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	AZI2	Q9H6S1	392 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	NMRK1	Q9NWW6	199 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	SUN2	Q9UH99	717 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	ZNF107	Q9UII5	783 aa	Predicted RBP	4.2	□□□□□ -1.74
USP33-217	ENST00000531637	ERVW-1	Q9UQF0	538 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	N6AMT1	Q9Y5N5	214 aa		4.2	□□□□□ -1.74
USP33-217	ENST00000531637	IGKV3D-20	A0A0C4DH25	116 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	IQANK1	A0A1B0GTG1	560 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	HELT	A6NFD8	242 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637		A8MXQ7	604 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	IDS	B3KWA1	339 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	AP3B1	O00203	1094 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	RGS16	O15492	202 aa	Predicted RBP	4.19	□□□□□ -1.74
USP33-217	ENST00000531637	RAMP3	O60896	148 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	CIB2	O75838	187 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	ATP5L	O75964	103 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	SERPINA3	P01011	423 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	PCMT1	P22061	227 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	FAS	P25445	335 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	CCR1	P32246	355 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	DUSP3	P51452	185 aa	Predicted RBP	4.19	□□□□□ -1.74
USP33-217	ENST00000531637	PKNOX1	P55347	436 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	SEC61G	P60059	68 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	LMO4	P61968	165 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.19	□□□□□ -1.74
USP33-217	ENST00000531637	HPS6	Q86YV9	775 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	C10orf35	Q96D05	121 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	HAVCR1	Q96D42	359 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	SERAC1	Q96JX3	654 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	CCNL2	Q96S94	520 aa	Predicted RBP	4.19	□□□□□ -1.74
USP33-217	ENST00000531637	GON7	Q9BXV9	100 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	DEFB126	Q9BYW3	111 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	CHIA	Q9BZP6	476 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	POLE4	Q9NR33	117 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.19	□□□□□ -1.74
USP33-217	ENST00000531637	CTNNA3	Q9UI47	895 aa		4.19	□□□□□ -1.74
USP33-217	ENST00000531637	IGHV1OR15-1	A0A075B7D0	117 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	XKRY2	A2RUG3	117 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	CCDC182	A6NF36	153 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	ZNF264	O43296	627 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	UGT1A9	O60656	530 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	NDUFB10	O96000	172 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	SEMG1	P04279	462 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	CCDC166	P0CW27	439 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	IL12A	P29459	219 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	CALCR	P30988	508 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	RFC4	P35249	363 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	ATP1B3	P54709	279 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	PRR30	Q53SZ7	412 aa	Predicted RBP	4.18	□□□□□ -1.74
USP33-217	ENST00000531637	ZNF774	Q6NX45	483 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	CXCL17	Q6UXB2	119 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	HSDL2	Q6YN16	418 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	H2BFWT	Q7Z2G1	175 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	CDH26	Q8IXH8	852 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	OR2L13	Q8N349	312 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	NEIL2	Q969S2	332 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	IFT74	Q96LB3	600 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	TCEANC2	Q96MN5	208 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	NOL4L	Q96MY1	436 aa	Predicted RBP	4.18	□□□□□ -1.74
USP33-217	ENST00000531637	EHD1	Q9H4M9	534 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	REEP4	Q9H6H4	257 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	VCPKMT	Q9H867	229 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	YY1AP1	Q9H869	796 aa		4.18	□□□□□ -1.74
USP33-217	ENST00000531637	RPL36	Q9Y3U8	105 aa	Known RBP	4.18	□□□□□ -1.74
USP33-217	ENST00000531637		A0A1B0GUS0	222 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	FAM47DP	A6NHR8	397 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	TNFSF11	O14788	317 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	WBP4	O75554	376 aa	Known RBP	4.17	□□□□□ -1.74
USP33-217	ENST00000531637	HTR1F	P30939	366 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	GYG1	P46976	350 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	RIPK4	P57078	832 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	KCTD21	Q4G0X4	260 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	C6orf226	Q5I0X4	101 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	SAMD4B	Q5PRF9	694 aa	Known RBP	4.17	□□□□□ -1.74
USP33-217	ENST00000531637	PRAMEF5	Q5TYX0	476 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	PRAMEF6	Q5VXH4	476 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637		Q6ZR54	194 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	MRAP	Q8TCY5	172 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.17	□□□□□ -1.74
USP33-217	ENST00000531637	FAM122A	Q96E09	287 aa		4.17	□□□□□ -1.74
USP33-217	ENST00000531637	TIMD4	Q96H15	378 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms