RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TTC9Q92623 222 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF566Q969W8 418 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 BPIFA2Q96DR5 249 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 PLA2G12AQ9BZM1 189 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 PRORYQ9H606 182 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 ABI3Q9P2A4 366 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 PCDHGA9Q9Y5G4 932 aaKnown RBP13.11□□□□□ -0.31
TTC39A-216ENST00000530004 LOC400499M0QZD8 3231 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 TPRP12270 2363 aaKnown RBP13.1□□□□□ -0.31
TTC39A-216ENST00000530004 A0A087WXM4 84 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 A6NHS1 94 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 ADAM10O14672 748 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 XPNPEP2O43895 674 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 CTBP2P56545 445 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 CXCR4P61073 352 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 TUBA4AP68366 448 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 MFAP5Q13361 173 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 SMN1Q16637 294 aaKnown RBP13.1□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-216ENST00000530004 C12orf73Q69YU5 71 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 TMPRSS11FQ6ZWK6 438 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 MISPQ8IVT2 679 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 CCDC103Q8IW40 242 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 OR10G3Q8NGC4 313 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 OR8D4Q8NGM9 314 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 OR5W2Q8NH69 310 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 DUSP19Q8WTR2 217 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 SPACA9Q96E40 222 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-216ENST00000530004 SMAD5Q99717 465 aaKnown RBP13.1□□□□□ -0.31
TTC39A-216ENST00000530004 ICAM5Q9UMF0 924 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 ACACBO00763 2458 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 DOCK10Q96BY6 2186 aa13.1□□□□□ -0.31
TTC39A-216ENST00000530004 UNC119BA6NIH7 251 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 NUDT14O95848 222 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 WDPCPO95876 746 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 TFAP2AP05549 437 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 GABRB1P18505 474 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 FUT1P19526 365 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 MST1P26927 711 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 SLC1A3P43003 542 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 GIPRP48546 466 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 P2RX1P51575 399 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 SMSP52788 366 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CDK5Q00535 292 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CRYZQ08257 329 aaKnown RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CBFBQ13951 182 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 GINS1Q14691 196 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 NTRK2Q16620 822 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 IGFL2Q6UWQ7 119 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 IL20RBQ6UXL0 311 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CASP12Q6UXS9 341 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 PTCHD4Q6ZW05 846 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 OSTF1Q92882 214 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF524Q96C55 264 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 GALNT9Q9HCQ5 603 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 HPF1Q9NWY4 346 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ANKRD10Q9NXR5 420 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 TUBA8Q9NY65 449 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 IL20Q9NYY1 176 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ANKRD11Q6UB99 2663 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ELOA3DA6NLF2 546 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ENO4A6NNW6 628 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 MKRN2OSH3BPM6 223 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CDK2AP1O14519 115 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 MPZL2O60487 215 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 PNMTP11086 282 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 PGCP20142 388 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 RPL5P46777 297 aaKnown RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CYB561P49447 251 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 GABARAPL2P60520 117 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 C17orf67Q0P5P2 114 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 TOMM34Q15785 309 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ELOA3BQ3SY89 546 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CLEC12AQ5QGZ9 265 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ACSM5Q6NUN0 579 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ATG4DQ86TL0 474 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
TTC39A-216ENST00000530004 ELOA3Q8NG57 546 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 RNF138Q8WVD3 245 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 SGCDQ92629 289 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 RNF32Q9H0A6 362 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 SLC25A19Q9HC21 320 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 TBC1D23Q9NUY8 699 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 TVP23BQ9NYZ1 205 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 PLA2G3Q9NZ20 509 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 KLRF1Q9NZS2 232 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 TPRKBQ9Y3C4 175 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
TTC39A-216ENST00000530004 EXPH5Q8NEV8 1989 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 TRIM64CA6NLI5 447 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.32
TTC39A-216ENST00000530004 PTGES3LE9PB15 166 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms