RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GPX7Q96SL4 187 aaPredicted RBP13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 ADOQ96SZ5 270 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 TEAD3Q99594 435 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 CDADC1Q9BWV3 514 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 SEMA4CQ9C0C4 833 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 ADAM19Q9H013 955 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 WDR70Q9NW82 654 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 ASB6Q9NWX5 421 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 ATXN7L1Q9ULK2 861 aaPredicted RBP13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 CARD8Q9Y2G2 431 aa13.53□□□□□ -0.24
ECHDC1-220ENST00000528402 HEATR5AQ86XA9 2040 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 TRAV27A0A087WT01 109 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 TRDV1A0A1B0GX56 115 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 OR6C70A6NIJ9 312 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 CDC40O60508 579 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■□□□□ 9.9
ECHDC1-220ENST00000528402 SCRG1O75711 98 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 HLA-DPB1P04440 258 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 NAGAP17050 411 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 PGCP20142 388 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 TAS2R43P59537 309 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 RUNX1T1Q06455 604 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 FHL1Q13642 323 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 TRAM1Q15629 374 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC35D3Q5M8T2 416 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF362Q5T0B9 420 aaPredicted RBP13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 LCN1P1Q5VSP4 162 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC23A3Q6PIS1 610 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 CD200R1LQ6Q8B3 271 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 PAQR6Q6TCH4 344 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 IGFN1Q86VF2 1251 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 PPP1R3BQ86XI6 285 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 EGFL6Q8IUX8 553 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 MFSD4AQ8N468 514 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 EID2Q8N6I1 236 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 OR5L2Q8NGL0 311 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF563Q8TA94 476 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 NUBPLQ8TB37 319 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 GATAD2BQ8WXI9 593 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 OTULINQ96BN8 352 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 OMA1Q96E52 524 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 MRPL48Q96GC5 212 aaKnown RBP13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 KCTD7Q96MP8 289 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 ENKD1Q9H0I2 346 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC26A1Q9H2B4 701 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC22A11Q9NSA0 550 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 CHRNA9Q9UGM1 479 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.25
ECHDC1-220ENST00000528402 A0A1B0GVG6 124 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 VSTM2BA6NLU5 285 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 SOCS6O14544 535 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 NDUFB5O43674 189 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 CBFA2T3O75081 653 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 ALOX12BO75342 701 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 PPP1R3DO95685 299 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 FGF5P12034 268 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 BMP4P12644 408 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 IDUAP35475 653 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 TGFBR1P36897 503 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 ETV6P41212 452 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 RPS3AP61247 264 aaKnown RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 DAB2P98082 770 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 IL10RAQ13651 578 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 GALEQ14376 348 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 CD226Q15762 336 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC35F1Q5T1Q4 408 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 OR2G6Q5TZ20 316 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF322Q6U7Q0 402 aaPredicted RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 ANKRD37Q7Z713 158 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 LHFPL3Q86UP9 236 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 POMGNT2Q8NAT1 580 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 BBS1Q8NFJ9 593 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 OR4F15Q8NGB8 312 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 OR51G2Q8NGK0 314 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 OR5W2Q8NH69 310 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 CHPT1Q8WUD6 406 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 NACC2Q96BF6 587 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 CCDC74BQ96LY2 380 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 ERMAPQ96PL5 475 aaPredicted RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 GFM1Q96RP9 751 aaKnown RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF649Q9BS31 505 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 TBL1XR1Q9BZK7 514 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 NRIP3Q9NQ35 241 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 RYDENQ9NUL5 291 aaKnown RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 TXNL4BQ9NX01 149 aaKnown RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 BABAM2Q9NXR7 383 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 C19orf25Q9UFG5 118 aaPredicted RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 SF3B6Q9Y3B4 125 aaKnown RBP13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 UGT2A1Q9Y4X1 527 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 CORINQ9Y5Q5 1042 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 NOX1Q9Y5S8 564 aa13.51□□□□□ -0.25
ECHDC1-220ENST00000528402 DAPL1A0PJW8 107 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 ISPDA4D126 451 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 LOC110117498-PIK3R3F6TDL0 507 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 J3QRK9 145 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC2A5P22732 501 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms