RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 UPB1Q9UBR1 384 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 MALT1Q9UDY8 824 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 CHRNA9Q9UGM1 479 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 AMDHD2Q9Y303 409 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 ATP23Q9Y6H3 246 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 A0A096LNT2 108 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 LMX1BO60663 402 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 EIF1BO60739 113 aaKnown RBP13.85□□□□□ -0.19
CTTN-212ENST00000527962 SLU7O95391 586 aaKnown RBP13.85□□□□□ -0.19
CTTN-212ENST00000527962 C8BP07358 591 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 APOBEC3AP31941 199 aaPredicted RBP13.85□□□□□ -0.19
CTTN-212ENST00000527962 SERPINB5P36952 375 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 HTR3AP46098 478 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 SLC16A1P53985 500 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 LSM11P83369 360 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTTN-212ENST00000527962 PGS1Q32NB8 556 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 ARHGAP11BQ3KRB8 267 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 C6orf136Q5SQH8 315 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 GRINAQ7Z429 371 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 C6orf120Q7Z4R8 191 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 C4orf33Q8N1A6 199 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 C10orf105Q8TEF2 133 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 RHOXF2Q9BQY4 288 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 C1orf50Q9BV19 199 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 POLE3Q9NRF9 147 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 MKLN1Q9UL63 735 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 KCNS2Q9ULS6 477 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 TRAPPC4Q9Y296 219 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 SLC9A8Q9Y2E8 581 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 FKBP7Q9Y680 259 aa13.85□□□□□ -0.19
CTTN-212ENST00000527962 ZNF716A6NP11 495 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 TMEM233B4DJY2 109 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 HAX1O00165 279 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 NDUFS8O00217 210 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 FCMRO60667 390 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 UGT2B17O75795 530 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 WNT11O96014 354 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 CHRNGP07510 517 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 GUSBP08236 651 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 SRD5A1P18405 259 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 EDNRAP25101 427 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 RPS26P62854 115 aaKnown RBP13.84□□□□□ -0.19
CTTN-212ENST00000527962 HBA1P69905 142 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 GABRA6Q16445 453 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 XKR7Q5GH72 579 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 FAM166AQ6J272 317 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 KLHL24Q6TFL4 600 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 KRTCAP2Q8N6L1 136 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 C1orf162Q8NEQ5 155 aaPredicted RBP13.84□□□□□ -0.19
CTTN-212ENST00000527962 VPS37AQ8NEZ2 397 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 KIF18AQ8NI77 898 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 AGR3Q8TD06 166 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 HTRA1Q92743 480 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 PMM1Q92871 262 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 TUBGCP3Q96CW5 907 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 SLC35G5Q96KT7 338 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 NAA11Q9BSU3 229 aaPredicted RBP13.84□□□□□ -0.19
CTTN-212ENST00000527962 CCDC106Q9BWC9 280 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 DCTN4Q9UJW0 460 aa13.84□□□□□ -0.19
CTTN-212ENST00000527962 RNF103-CHMP3A0A140T963 221 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 A0A1W2PR80 420 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 SHBGP04278 402 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 UQCRBP14927 111 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 PAX7P23759 505 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 RYKP34925 604 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 PDLIM4P50479 330 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 MAP2K6P52564 334 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 OR2B6P58173 313 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 PRPS1P60891 318 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 PHC1P78364 1004 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 SLC35A1P78382 337 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 HPCAP84074 193 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 SPOCK1Q08629 439 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 CASP12Q6UXS9 341 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 RIMKLAQ8IXN7 391 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 ARFGAP2Q8N6H7 521 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 EIF1ADQ8N9N8 165 aaKnown RBP13.83□□□□□ -0.2
CTTN-212ENST00000527962 XAGE5Q8WWM1 108 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 ZNF524Q96C55 264 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 DDIT4LQ96D03 193 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 KCNS3Q9BQ31 491 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 PIMREGQ9BSJ6 248 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 C1QTNF6Q9BXI9 259 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 ZNF350Q9GZX5 532 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 CTPS2Q9NRF8 586 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 TMEM181Q9P2C4 612 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 WDR45Q9Y484 360 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 FREM1Q5H8C1 2179 aa13.83□□□□□ -0.2
CTTN-212ENST00000527962 CR1P17927 2039 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 IGHV4-31P0DP07 118 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 ZNF16P17020 682 aaPredicted RBP13.82□□□□□ -0.2
CTTN-212ENST00000527962 ALDH3A1P30838 453 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 PGM1P36871 562 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 CLDN8P56748 225 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 SNRPD2P62316 118 aaKnown RBP13.82□□□□□ -0.2
CTTN-212ENST00000527962 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 ABHD12BQ7Z5M8 362 aaPredicted RBP13.82□□□□□ -0.2
CTTN-212ENST00000527962 ZNF540Q8NDQ6 660 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 APOPT1Q96IL0 206 aa13.82□□□□□ -0.2
CTTN-212ENST00000527962 ARL5BQ96KC2 179 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms