RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PRDM4Q9UKN5 801 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 MKLN1Q9UL63 735 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SLC35A3Q9Y2D2 325 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 WDR45Q9Y484 360 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 GPR45Q9Y5Y3 372 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 A0A096LNT2 108 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ELOA3DA6NLF2 546 aaPredicted RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 KIAA0513O60268 411 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ERLIN1O75477 346 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 PRKD3O94806 890 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 CSTAP01040 98 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 YES1P07947 543 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ALDOCP09972 364 aaKnown RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 OR12D1P0DN82 309 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 PGCP20142 388 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 IL32P24001 234 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 SHC1P29353 583 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 AGTR1P30556 359 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 PGM1P36871 562 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 KHKP50053 298 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ANXA11P50995 505 aaKnown RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 UFM1P61960 85 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 SQLEQ14534 574 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 PGGHGQ32M88 737 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 NDUFAF6Q330K2 333 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ELOA3BQ3SY89 546 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 FAM174BQ3ZCQ3 159 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 TMEM201Q5SNT2 666 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 AGAP6Q5VW22 663 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 TYW3Q6IPR3 259 aaKnown RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 C3orf33Q6P1S2 294 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 EIF3MQ7L2H7 374 aaKnown RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 CLEC4FQ8N1N0 589 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF619Q8N2I2 560 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF614Q8N883 585 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ANKRD42Q8N9B4 389 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 FAM71CQ8NEG0 241 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ELOA3Q8NG57 546 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ZFP90Q8TF47 636 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 HSD17B8Q92506 261 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 NEUROG1Q92886 237 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 S100PBPQ96BU1 408 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ROPN1LQ96C74 230 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 TLCD1Q96CP7 247 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 MAELQ96JY0 434 aaKnown RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 TEX37Q96LM6 180 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 USB1Q9BQ65 265 aaKnown RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 SLC35A5Q9BS91 424 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 SRXN1Q9BYN0 137 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 TMEM185BQ9H7F4 350 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 COQ10BQ9H8M1 238 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 EXOSC3Q9NQT5 275 aaKnown RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 SERINC1Q9NRX5 453 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 ACER3Q9NUN7 267 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 MARCOQ9UEW3 520 aaPredicted RBP9.32□□□□□ -0.92
CPSF1-203ENST00000527916 KCNS2Q9ULS6 477 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 CLEC4AQ9UMR7 237 aa9.32□□□□□ -0.92
CPSF1-203ENST00000527916 CCDC154A6NI56 674 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 KLF11O14901 512 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 CD8AP01732 235 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 IL6P05231 212 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF16P17020 682 aaPredicted RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 IL12AP29459 219 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 CHI3L1P36222 383 aaPredicted RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 APOBEC1P41238 236 aaKnown RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 GZMKP49863 264 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 SESN3P58005 492 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 MAGOHP61326 146 aaKnown RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 FUT5Q11128 374 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 MAPK14Q16539 360 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 TIGD2Q4W5G0 525 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 BEND6Q5SZJ8 279 aaPredicted RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 FAM166AQ6J272 317 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 TNFAIP8L2Q6P589 184 aaPredicted RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 C12orf54Q6X4T0 127 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 FRRS1Q6ZNA5 592 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 FCRLAQ7L513 359 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 DTX2Q86UW9 622 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 TUSC5Q8IXB3 177 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 CMIPQ8IY22 773 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 TMCO5AQ8N6Q1 288 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 KBTBD8Q8NFY9 601 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 RFWD2Q8NHY2 731 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 ABHD3Q8WU67 409 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 SLC25A43Q8WUT9 341 aaPredicted RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 RAB8BQ92930 207 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 TRNT1Q96Q11 434 aaKnown RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 OR52E6Q96RD3 313 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 PANX1Q96RD7 426 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 TRIM2Q9C040 744 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 MANSC1Q9H8J5 431 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 BCO1Q9HAY6 547 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 TMBIM4Q9HC24 238 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 NKIRAS1Q9NYS0 192 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 CISD1Q9NZ45 108 aaKnown RBP9.31□□□□□ -0.92
CPSF1-203ENST00000527916 KLHL9Q9P2J3 617 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 KLHL13Q9P2N7 655 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 DYSFO75923 2080 aa9.31□□□□□ -0.92
CPSF1-203ENST00000527916 CENPVL1A0A0U1RR11 272 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms