RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 CPEB2Q7Z5Q1 589 aaKnown RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 MTHFD2LQ9H903 347 aaPredicted RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 NEURL4Q96JN8 1562 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 ELLP55199 621 aaPredicted RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 ZNF239Q16600 458 aaKnown RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 TMEM201Q5SNT2 666 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 SERPINA11Q86U17 422 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 LRRTM1Q86UE6 522 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 KDF1Q8NAX2 398 aaPredicted RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 B3GNT7Q8NFL0 401 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 C11orf84Q9BUA3 381 aaPredicted RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 NMES1Q9C002 83 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 DDX31Q9H8H2 851 aaKnown RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 EGFP01133 1207 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 HNRNPA2B1P22626 353 aaKnown RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 ATP1B3P54709 279 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 C12orf10Q9HB07 376 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 STEAP1Q9UHE8 339 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 INTS6Q9UL03 887 aaKnown RBP12.85□□□□□ -0.35
LRRK1-202ENST00000525284 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
LRRK1-202ENST00000525284 SPATA31A6Q5VVP1 1343 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 ADH1BP00325 375 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SLURP2P0DP57 97 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 CD1DP15813 335 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 AADACP22760 399 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 RPS15AP62244 130 aaKnown RBP12.84□□□□□ -0.35
LRRK1-202ENST00000525284 GPM6BQ13491 265 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SLC10A6Q3KNW5 377 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 ZMAT1Q5H9K5 638 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 PAGE3Q5JUK9 113 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 VHLLQ6RSH7 139 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 BTNL8Q6UX41 500 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 OR1S2Q8NGQ3 325 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SHDQ96IW2 340 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 ZFYVE21Q9BQ24 234 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 MCOLN1Q9GZU1 580 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 TNFRSF10AO00220 468 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 GSTP1P09211 210 aaKnown RBP12.84□□□□□ -0.35
LRRK1-202ENST00000525284 GM2AP17900 193 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 FUT1P19526 365 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 TCTE1Q5JU00 501 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 OR2M7Q8NG81 312 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SEMA4CQ9C0C4 833 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SSUH2Q9Y2M2 353 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 STYXL1Q9Y6J8 313 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 A6NIZ1 184 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 DUX1O43812 170 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SUSD5O60279 629 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 HLA-FP30511 346 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 RAP1BP61224 184 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 RAP1AP62834 184 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 FCRLAQ7L513 359 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SUMF1Q8NBK3 374 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 FUBP3Q96I24 572 aaKnown RBP eCLIP12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SFXN2Q96NB2 322 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 MARCH4Q9P2E8 410 aaPredicted RBP12.84□□□□□ -0.35
LRRK1-202ENST00000525284 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
LRRK1-202ENST00000525284 GABREP78334 506 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 C9orf152Q5JTZ5 239 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 PLAG1Q6DJT9 500 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 HUS1BQ8NHY5 278 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SFT2D1Q8WV19 159 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 SCAMP4Q969E2 229 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 C5AR2Q9P296 337 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 GNG12Q9UBI6 72 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 NRP1O14786 923 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 EOMESO95936 686 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 CD63P08962 238 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 OR8U8P0C7N1 319 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 DRD2P14416 443 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 ZNF90Q03938 601 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 C9orf135Q5VTT2 229 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 TPGS2Q68CL5 300 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 CDS1Q92903 461 aa12.84□□□□□ -0.35
LRRK1-202ENST00000525284 F10P00742 488 aa12.83□□□□□ -0.35
LRRK1-202ENST00000525284 TBPP20226 339 aa12.83□□□□□ -0.35
LRRK1-202ENST00000525284 TEAD2Q15562 447 aa12.83□□□□□ -0.35
LRRK1-202ENST00000525284 ZNF542PQ5EBM4 170 aa12.83□□□□□ -0.35
LRRK1-202ENST00000525284 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.35
LRRK1-202ENST00000525284 SERINC2Q96SA4 455 aa12.83□□□□□ -0.35
LRRK1-202ENST00000525284 LIN7BQ9HAP6 207 aa12.83□□□□□ -0.35
LRRK1-202ENST00000525284 IL1RNP18510 177 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 EVX2Q03828 476 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 MPEG1Q2M385 716 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 VWA1Q6PCB0 445 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 GLIS1Q8NBF1 620 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 NT5DC2Q9H857 520 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 SPHK1Q9NYA1 384 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 OR2M5A3KFT3 312 aa12.83□□□□□ -0.36
LRRK1-202ENST00000525284 AQP7P3A6NL99 342 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms