RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 OR52E4Q8NGH9 312 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 OR7D2Q96RA2 312 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 SLC17A5Q9NRA2 495 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 SIRT3Q9NTG7 399 aaPredicted RBP10.08□□□□□ -0.8
MRPS28-206ENST00000520946 ACER3Q9NUN7 267 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 EXD2Q9NVH0 621 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 CHRNA9Q9UGM1 479 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 TMEFF2Q9UIK5 374 aaPredicted RBP10.08□□□□□ -0.8
MRPS28-206ENST00000520946 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 SLC9A8Q9Y2E8 581 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 HDGFL3Q9Y3E1 203 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 KCNE3Q9Y6H6 103 aa10.08□□□□□ -0.8
MRPS28-206ENST00000520946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.08□□□□□ -0.8
MRPS28-206ENST00000520946 YLPM1P49750 1951 aaKnown RBP10.07□□□□□ -0.8
MRPS28-206ENST00000520946 IGHV4-61A0A0C4DH41 118 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 G3V2L1 256 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 SCAMP2O15127 329 aaKnown RBP10.07□□□□□ -0.8
MRPS28-206ENST00000520946 SPRY1O43609 319 aaPredicted RBP10.07□□□□□ -0.8
MRPS28-206ENST00000520946 PMS2P2O95744 297 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 C6orf47O95873 294 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 AK1P00568 194 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 CRYAAP02489 173 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 ABHD2P08910 425 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 LAMP1P11279 417 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 BCKDHAP12694 445 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 ZNF23P17027 643 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 MATN1P21941 496 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 SLC1A3P43003 542 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 CHN2P52757 468 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 UBE2NP61088 152 aaKnown RBP10.07□□□□□ -0.8
MRPS28-206ENST00000520946 FAM153CQ494X1 144 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 C1QTNF12Q5T7M4 302 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 LIPMQ5VYY2 423 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 ABLIM2Q6H8Q1 611 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 UGT2A3Q6UWM9 527 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 TRMT10CQ7L0Y3 403 aaKnown RBP10.07□□□□□ -0.8
MRPS28-206ENST00000520946 CCDC103Q8IW40 242 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 ANKS4BQ8N8V4 417 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 C1orf162Q8NEQ5 155 aaPredicted RBP10.07□□□□□ -0.8
MRPS28-206ENST00000520946 OR5D16Q8NGK9 328 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 OR5AK3PQ8NH89 298 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 SFXN5Q8TD22 340 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 DDIT4LQ96D03 193 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 PPP3R2Q96LZ3 170 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 SORCS2Q96PQ0 1159 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 SDF2Q99470 211 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 PLA2G12AQ9BZM1 189 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 BPESC1Q9GZL8 116 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 NMUR2Q9GZQ4 415 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 CTPS2Q9NRF8 586 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 MALT1Q9UDY8 824 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 ATP6V1HQ9UI12 483 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 MID2Q9UJV3 735 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 DCTN4Q9UJW0 460 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 FBXO9Q9UK97 447 aaPredicted RBP10.07□□□□□ -0.8
MRPS28-206ENST00000520946 MKLN1Q9UL63 735 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 CCL27Q9Y4X3 112 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 PCDHB14Q9Y5E9 798 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 MALRD1Q5VYJ5 2156 aa10.07□□□□□ -0.8
MRPS28-206ENST00000520946 ZNF716A6NP11 495 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 VWC2LB2RUY7 222 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 B9A039 149 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 NPIPB8E9PQR5 432 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 KLF11O14901 512 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 DNPH1O43598 174 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 EIF1BO60739 113 aaKnown RBP10.06□□□□□ -0.8
MRPS28-206ENST00000520946 ITGA5P08648 1049 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 ITGA2P17301 1181 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 APEX1P27695 318 aaKnown RBP10.06□□□□□ -0.8
MRPS28-206ENST00000520946 MPGP29372 298 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 CLK1P49759 484 aaKnown RBP10.06□□□□□ -0.8
MRPS28-206ENST00000520946 ACTG1P63261 375 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 SLC35A1P78382 337 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 HPCAP84074 193 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 SCGB2A2Q13296 93 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 SKP2Q13309 424 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 WHAMMP3Q1A5X7 153 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 PGS1Q32NB8 556 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 ATP6AP1LQ52LC2 224 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 EXOSC6Q5RKV6 272 aaKnown RBP10.06□□□□□ -0.8
MRPS28-206ENST00000520946 GRINAQ7Z429 371 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 LINC01356Q8N9X3 169 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 WDR31Q8NA23 367 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 OR2T11Q8NH01 316 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 BHLHE41Q9C0J9 482 aaPredicted RBP10.06□□□□□ -0.8
MRPS28-206ENST00000520946 TNFRSF12AQ9NP84 129 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 GPATCH2Q9NW75 528 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 TMEM45AQ9NWC5 275 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 OXSMQ9NWU1 459 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 TMEM181Q9P2C4 612 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 SLC35A3Q9Y2D2 325 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 PLCE1Q9P212 2302 aa10.06□□□□□ -0.8
MRPS28-206ENST00000520946 LRP5LA4QPB2 252 aa10.05□□□□□ -0.8
MRPS28-206ENST00000520946 NPIPB9F8W1W9 429 aa10.05□□□□□ -0.8
MRPS28-206ENST00000520946 COPEO14579 308 aa10.05□□□□□ -0.8
MRPS28-206ENST00000520946 LSM1O15116 133 aaKnown RBP10.05□□□□□ -0.8
MRPS28-206ENST00000520946 RIPK2O43353 540 aa10.05□□□□□ -0.8
MRPS28-206ENST00000520946 PEX11AO75192 247 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms