RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 KCNK9Q9NPC2 374 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 EXOSC3Q9NQT5 275 aaKnown RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 MARCOQ9UEW3 520 aaPredicted RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 CHRNA9Q9UGM1 479 aa10.99□□□□□ -0.65
CSMD1-205ENST00000519623 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
CSMD1-205ENST00000519623 CCDC154A6NI56 674 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 SHISA9B4DS77 424 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 SDHDO14521 159 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 PMS2P2O95744 297 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 CD8AP01732 235 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 FKBP2P26885 142 aaKnown RBP10.98□□□□□ -0.65
CSMD1-205ENST00000519623 PCSK6P29122 969 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 CHI3L1P36222 383 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-205ENST00000519623 IDH2P48735 452 aaKnown RBP10.98□□□□□ -0.65
CSMD1-205ENST00000519623 CLK1P49759 484 aaKnown RBP10.98□□□□□ -0.65
CSMD1-205ENST00000519623 KHKP50053 298 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 NME5P56597 212 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 H3F3AP84243 136 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 PPA1Q15181 289 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 SYPL1Q16563 259 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 GPAT3Q53EU6 434 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 TIMM23BQ5SRD1 257 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 CEP85LQ5SZL2 805 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 FBXW9Q5XUX1 488 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 GRINAQ7Z429 371 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 P2RY8Q86VZ1 359 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 LSRQ86X29 649 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-205ENST00000519623 CCDC103Q8IW40 242 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 KIRREL3Q8IZU9 778 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 ARFGAP2Q8N6H7 521 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 KBTBD8Q8NFY9 601 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 ZNF563Q8TA94 476 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 DNAJA3Q96EY1 480 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 TRNT1Q96Q11 434 aaKnown RBP10.98□□□□□ -0.65
CSMD1-205ENST00000519623 INPP5KQ9BT40 448 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 OR11A1Q9GZK7 315 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 SLC38A1Q9H2H9 487 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 AIG1Q9NVV5 245 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 NPAP1Q9NZP6 1156 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 RAB21Q9UL25 225 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 LIPT1Q9Y234 373 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 TRAPPC4Q9Y296 219 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 HDGFL3Q9Y3E1 203 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 MAGED1Q9Y5V3 778 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-205ENST00000519623 GPR45Q9Y5Y3 372 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 ABCA1O95477 2261 aa10.98□□□□□ -0.65
CSMD1-205ENST00000519623 HEATR1Q9H583 2144 aaKnown RBP10.97□□□□□ -0.65
CSMD1-205ENST00000519623 GOLGA8QA0A0J9YX86 632 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 GOLGA8OA6NCC3 632 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 AGAP5A6NIR3 686 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 OR5H1A6NKK0 313 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 INAFM1C9JVW0 142 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 GOLGA8NF8WBI6 632 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 AP3D1O14617 1153 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 DNPH1O43598 174 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 IGHV3-9P01782 118 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 CHRM4P08173 479 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 GGT1P19440 569 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 CDKN2CP42773 168 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 SLC16A1P53985 500 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 WDR4P57081 412 aaKnown RBP10.97□□□□□ -0.65
CSMD1-205ENST00000519623 KRTAP1-1Q07627 177 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 MAPK11Q15759 364 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 STK11Q15831 433 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 CLEC12BQ2HXU8 276 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 COX20Q5RI15 118 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 LRRC74BQ6ZQY2 392 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 ZNF621Q6ZSS3 439 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 SPATA19Q7Z5L4 167 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 CMIPQ8IY22 773 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 MUCL1Q96DR8 90 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 TRMT61AQ96FX7 289 aaKnown RBP10.97□□□□□ -0.65
CSMD1-205ENST00000519623 OR52E6Q96RD3 313 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 GRIP2Q9C0E4 1043 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 CENPHQ9H3R5 247 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 MTHFD2LQ9H903 347 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-205ENST00000519623 CISD1Q9NZ45 108 aaKnown RBP10.97□□□□□ -0.65
CSMD1-205ENST00000519623 EMC3Q9P0I2 261 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 TMEM181Q9P2C4 612 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 OSGIN1Q9UJX0 560 aa10.97□□□□□ -0.65
CSMD1-205ENST00000519623 NOSIPQ9Y314 301 aaKnown RBP10.97□□□□□ -0.65
CSMD1-205ENST00000519623 SPIN1Q9Y657 262 aaPredicted RBP10.97□□□□□ -0.65
CSMD1-205ENST00000519623 CR1P17927 2039 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 TMED7-TICAM2A0A0A6YYA0 188 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 A0A1W2PP18 115 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 KIAA1324LA8MWY0 1029 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-205ENST00000519623 GPR171O14626 319 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 NDUFS7O75251 213 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 GSNP06396 782 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 PGRP06401 933 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 IMPDH2P12268 514 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 CCNA2P20248 432 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 RPS4Y1P22090 263 aaKnown RBP10.96□□□□□ -0.65
CSMD1-205ENST00000519623 EPHA3P29320 983 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 IDUAP35475 653 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 CDKN1AP38936 164 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 HTR3AP46098 478 aa10.96□□□□□ -0.65
CSMD1-205ENST00000519623 FOXG1P55316 489 aaPredicted RBP10.96□□□□□ -0.65
CSMD1-205ENST00000519623 OR2B6P58173 313 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms