RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CASP3P42574 277 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC9A3P48764 834 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PCYT1AP49585 367 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 POLR2HP52434 150 aaKnown RBP6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC35A2P78381 396 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NHLH1Q02575 133 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SNTA1Q13424 505 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TOMM34Q15785 309 aaPredicted RBP6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SNAPC1Q16533 368 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SMN1Q16637 294 aaKnown RBP6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PGGHGQ32M88 737 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CLEC12AQ5QGZ9 265 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC22A10Q63ZE4 541 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 BICRALQ6AI39 1079 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR5M10Q6IEU7 315 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC30A6Q6NXT4 461 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMEM81Q6P7N7 255 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SMARCD3Q6STE5 483 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GRINAQ7Z429 371 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OAFQ86UD1 273 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DTX1Q86Y01 620 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CCDC103Q8IW40 242 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CYP4Z2PQ8N1L4 340 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SIRT6Q8N6T7 355 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 C10orf53Q8N6V4 93 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TCEANCQ8N8B7 351 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF540Q8NDQ6 660 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR2T33Q8NG76 320 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR51A7Q8NH64 312 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 BRIX1Q8TDN6 353 aaKnown RBP6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ADAMTS17Q8TE56 1095 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 IPCEF1Q8WWN9 437 aaPredicted RBP6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 THOC3Q96J01 351 aaKnown RBP6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SGCZQ96LD1 299 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FER1L6-AS2Q96M78 137 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 IL4I1Q96RQ9 567 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KLHDC3Q9BQ90 382 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DUSP21Q9H596 190 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CPNE5Q9HCH3 593 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CCNB1IP1Q9NPC3 277 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PLCXD1Q9NUJ7 323 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 WDR70Q9NW82 654 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 HPF1Q9NWY4 346 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DLL3Q9NYJ7 618 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MED11Q9P086 117 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TEKT2Q9UIF3 430 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OSGIN1Q9UJX0 560 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 BAIAP2Q9UQB8 552 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SIGLEC7Q9Y286 467 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMED7Q9Y3B3 224 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SNX5Q9Y5X3 404 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CHCHD2Q9Y6H1 151 aaPredicted RBP6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CEP250Q9BV73 2442 aa6.95□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TRAV36DV7A0A075B6V5 113 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TRAV27A0A087WT01 109 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RGS10O43665 173 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TLX2O43763 284 aaPredicted RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRKYO43930 277 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SUSD5O60279 629 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MRPS14O60783 128 aaKnown RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PTP4A3O75365 173 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR7A10O76100 309 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DXOO77932 396 aaKnown RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NDUFB2O95178 105 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CH25HO95992 272 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LIFP15018 202 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRKCAP17252 672 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CCNA2P20248 432 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC6A6P31641 620 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GRK5P34947 590 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ST13P50502 369 aaKnown RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF41P51814 821 aaPredicted RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GTF2A1P52655 376 aaPredicted RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NUDT6P53370 316 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 AIMP2Q13155 320 aaKnown RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TGIF1Q15583 401 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OCLNQ16625 522 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZBED5Q49AG3 693 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ACER2Q5QJU3 275 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DCAF10Q5QP82 559 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TMEM201Q5SNT2 666 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PRAMEF20Q5VT98 475 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MEDAGQ5VYS4 303 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 B3GNTL1Q67FW5 361 aaPredicted RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 POMZP3Q6PJE2 187 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 C5orf46Q6UWT4 87 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RTL4Q6ZR62 310 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 AHSA2Q719I0 299 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC46A3Q7Z3Q1 461 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GPALPP1Q8IXQ4 340 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR2M3Q8NG83 312 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR4K17Q8NGC6 315 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR4Q3Q8NH05 313 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PAQR8Q8TEZ7 354 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PSMF1Q92530 271 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF524Q96C55 264 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 PLEKHA8Q96JA3 519 aa6.94□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TNFRSF13CQ96RJ3 184 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms