RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TRAPPC4Q9Y296 219 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 ANKRD17O75179 2603 aaKnown RBP11.4□□□□□ -0.58
CLCN3-210ENST00000515420 A0A1W2PNR3 127 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 SH3D21A4FU49 640 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 SULT2B1O00204 365 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 AP3D1O14617 1153 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 SLC22A2O15244 555 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 CYTIPO60759 359 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 NPPAP01160 153 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 POU2F1P14859 743 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ENPP1P22413 925 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 PRKAR1BP31321 381 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 MDH1P40925 334 aaKnown RBP11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ACAA2P42765 397 aaKnown RBP11.4□□□□□ -0.58
CLCN3-210ENST00000515420 COPZ1P61923 177 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 CDK6Q00534 326 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 RBBP4Q09028 425 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 SNTB1Q13884 538 aaKnown RBP11.4□□□□□ -0.58
CLCN3-210ENST00000515420 PDK3Q15120 406 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 MAPRE2Q15555 327 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF311Q5JNZ3 666 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 TMEM201Q5SNT2 666 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 CGB2Q6NT52 195 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 BEND4Q6ZU67 534 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 STK32CQ86UX6 486 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 TMEM200AQ86VY9 491 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ATP6V1C2Q8NEY4 427 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 BHLHE22Q8NFJ8 381 aaPredicted RBP11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ABHD3Q8WU67 409 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ROBO4Q8WZ75 1007 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 DDIT4LQ96D03 193 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ZHX1-C8orf76Q96EF9 292 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ANKRD27Q96NW4 1050 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 ADAM19Q9H013 955 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 OR10A4Q9H209 315 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 IKZF5Q9H5V7 419 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 EVA1AQ9H8M9 152 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 RASSF1Q9NS23 344 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 RLIMQ9NVW2 624 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 KLHL14Q9P2G3 628 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 OSGIN1Q9UJX0 560 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 TESMINQ9Y4I5 508 aa11.4□□□□□ -0.58
CLCN3-210ENST00000515420 CSMD2Q7Z408 3487 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 TMED7-TICAM2A0A0A6YYA0 188 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 PRORSD1PA6NEY8 169 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ZNF724A8MTY0 619 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 BBIP1A8MTZ0 92 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 C16orf97H3BN30 126 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 SMAD9O15198 467 aaKnown RBP11.39□□□□□ -0.59
CLCN3-210ENST00000515420 YES1P07947 543 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 TFPIP10646 304 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 CD1EP15812 388 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 PPP3CBP16298 524 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 SLC6A2P23975 617 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 TACR3P29371 465 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 UGT2B10P36537 528 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 KCNJ5P48544 419 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 KRTAP10-9P60411 292 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 FAM27E3Q08E93 113 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 NFYCQ13952 458 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 SCARB2Q14108 478 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ADRM1Q16186 407 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 TRMT5Q32P41 509 aaKnown RBP11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ABLIM2Q6H8Q1 611 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 WBP2NLQ6ICG8 309 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 DHRS4L2Q6PKH6 230 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 NET1Q7Z628 596 aaPredicted RBP11.39□□□□□ -0.59
CLCN3-210ENST00000515420 MTDHQ86UE4 582 aaKnown RBP11.39□□□□□ -0.59
CLCN3-210ENST00000515420 SLC30A8Q8IWU4 369 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 C10orf111Q8N326 155 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 CLIP4Q8N3C7 705 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ZNF610Q8N9Z0 462 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 HIPK4Q8NE63 616 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 NFKBIDQ8NI38 313 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 LINC01560Q8TB33 94 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ARL5BQ96KC2 179 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ZNF317Q96PQ6 595 aaPredicted RBP11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ZNF607Q96SK3 696 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 PSD2Q9BQI7 771 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 CLEC4AQ9UMR7 237 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ANGPT4Q9Y264 503 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 TMED7Q9Y3B3 224 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 CHST2Q9Y4C5 530 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 ABCA4P78363 2273 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 MYO9AB2RTY4 2548 aa11.39□□□□□ -0.59
CLCN3-210ENST00000515420 FREM1Q5H8C1 2179 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 SPG11Q96JI7 2443 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 IGKV3D-15A0A087WSY6 115 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 ENO4A6NNW6 628 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 EIF1BO60739 113 aaKnown RBP11.38□□□□□ -0.59
CLCN3-210ENST00000515420 SERPINB7O75635 380 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 FESP07332 822 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 GKN3PP0CG01 181 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 CXCR1P25024 350 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 CCKARP32238 428 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 RASGEF1BQ0VAM2 473 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 TFAP2EQ6VUC0 442 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 CDH24Q86UP0 819 aa11.38□□□□□ -0.59
CLCN3-210ENST00000515420 TUSC5Q8IXB3 177 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms