RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 RAD51DO75771 328 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 SNUPNO95149 360 aaKnown RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 GSNP06396 782 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 CCNA2P20248 432 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 NTF4P34130 210 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 APOBEC1P41238 236 aaKnown RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 IDH2P48735 452 aaKnown RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 KCNJ10P78508 379 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 FAPQ12884 760 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 TNK1Q13470 666 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 PPA1Q15181 289 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 PGGHGQ32M88 737 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 COX20Q5RI15 118 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 DNAJC14Q6Y2X3 702 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 MTDHQ86UE4 582 aaKnown RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 PRIMA1Q86XR5 153 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 ZNF100Q8IYN0 542 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 LRRC34Q8IZ02 419 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 ARFGAP2Q8N6H7 521 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 MAPK1IP1LQ8NDC0 245 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 SMAP2Q8WU79 429 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 OIT3Q8WWZ8 545 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 PANX1Q96RD7 426 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 TRIM2Q9C040 744 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 SLC38A1Q9H2H9 487 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 WDR55Q9H6Y2 383 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 EXOSC3Q9NQT5 275 aaKnown RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 RAB21Q9UL25 225 aa11.76□□□□□ -0.53
PFDN1-206ENST00000514611 SPIN1Q9Y657 262 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-206ENST00000514611 NUP214P35658 2090 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-206ENST00000514611 PRR14LQ5THK1 2151 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 IGKV3D-15A0A087WSY6 115 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 A0A1W2PP18 115 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 CCDC154A6NI56 674 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 TMCC2O75069 709 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 PMS2P2O95744 297 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 PGRP06401 933 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 GGT1P19440 569 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 EPHA3P29320 983 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
PFDN1-206ENST00000514611 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 VEZF1Q14119 521 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 CLEC12BQ2HXU8 276 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 TIMM23BQ5SRD1 257 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 ADGRG3Q86Y34 549 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 CCDC103Q8IW40 242 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 KIRREL3Q8IZU9 778 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 ZNF433Q8N7K0 673 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-206ENST00000514611 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 GTPBP3Q969Y2 492 aaKnown RBP11.75□□□□□ -0.53
PFDN1-206ENST00000514611 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-206ENST00000514611 EMC3Q9P0I2 261 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 LIPT1Q9Y234 373 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 NOSIPQ9Y314 301 aaKnown RBP11.75□□□□□ -0.53
PFDN1-206ENST00000514611 HDGFL3Q9Y3E1 203 aa11.75□□□□□ -0.53
PFDN1-206ENST00000514611 NSD1Q96L73 2696 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-206ENST00000514611 CUBNO60494 3623 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 ARID1AO14497 2285 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 A0A1W2PR80 420 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 TMEM72A0PK05 275 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 OR5H1A6NKK0 313 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 ABCD4O14678 606 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 NDUFS7O75251 213 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 KITP10721 976 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 RPS4Y1P22090 263 aaKnown RBP11.74□□□□□ -0.53
PFDN1-206ENST00000514611 CDH11P55287 796 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 FOXG1P55316 489 aaPredicted RBP11.74□□□□□ -0.53
PFDN1-206ENST00000514611 OR2B6P58173 313 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 PDK3Q15120 406 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 MRPL2Q5T653 305 aaKnown RBP11.74□□□□□ -0.53
PFDN1-206ENST00000514611 HHATQ5VTY9 493 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 FBXW9Q5XUX1 488 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 AP1ARQ63HQ0 302 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 ZNF621Q6ZSS3 439 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 UBE2J2Q8N2K1 259 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 TRIML2Q8N7C3 387 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 OR52N5Q8NH56 324 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 PIGXQ8TBF5 258 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 WDR60Q8WVS4 1066 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 APH1AQ96BI3 265 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 ZHX1-C8orf76Q96EF9 292 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 TRNT1Q96Q11 434 aaKnown RBP11.74□□□□□ -0.53
PFDN1-206ENST00000514611 OR52E6Q96RD3 313 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
PFDN1-206ENST00000514611 SLC6A13Q9NSD5 602 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 OSGIN1Q9UJX0 560 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 GPR45Q9Y5Y3 372 aa11.74□□□□□ -0.53
PFDN1-206ENST00000514611 TMED7-TICAM2A0A0A6YYA0 188 aa11.73□□□□□ -0.53
PFDN1-206ENST00000514611 TMEM120BA0PK00 339 aa11.73□□□□□ -0.53
PFDN1-206ENST00000514611 ZC3H12DA2A288 527 aaKnown RBP11.73□□□□□ -0.53
PFDN1-206ENST00000514611 AGAP5A6NIR3 686 aa11.73□□□□□ -0.53
PFDN1-206ENST00000514611 SNNO75324 88 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-206ENST00000514611 PGM3O95394 542 aa11.73□□□□□ -0.53
PFDN1-206ENST00000514611 IGHV4-39P01824 125 aa11.73□□□□□ -0.53
PFDN1-206ENST00000514611 ROS1P08922 2347 aa11.73□□□□□ -0.53
PFDN1-206ENST00000514611 IMPDH2P12268 514 aa11.73□□□□□ -0.53
PFDN1-206ENST00000514611 PTNP21246 168 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms