RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-209	ENST00000512130	PKNOX1	P55347	436 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	TNFRSF17	Q02223	184 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	KYAT1	Q16773	422 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	IMMT	Q16891	758 aa	Known RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	PRR30	Q53SZ7	412 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	GDPD3	Q7L5L3	318 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	C17orf82	Q86X59	251 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZNF100	Q8IYN0	542 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	MFSD9	Q8NBP5	474 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	OR10H4	Q8NGA5	316 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	PAQR8	Q8TEZ7	354 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	B3GALT6	Q96L58	329 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	MAGEB18	Q96M61	343 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	CLCC1	Q96S66	551 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZNF184	Q99676	751 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZNF670	Q9BS34	389 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	PARD6B	Q9BYG5	372 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	MAGT1	Q9H0U3	335 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	FN3KRP	Q9HA64	309 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	SGK2	Q9HBY8	427 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	MCCC2	Q9HCC0	563 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	POLE4	Q9NR33	117 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	TNFRSF19	Q9NS68	423 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	BFAR	Q9NZS9	450 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	ONECUT1	Q9UBC0	465 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	TMCO1	Q9UM00	188 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	UBQLN1	Q9UMX0	589 aa	Known RBP	4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130	PIGL	Q9Y2B2	252 aa		4.18	□□□□□ -1.74
LINC01088-209	ENST00000512130		A0A1B0GUS0	222 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	TUBAL3	A6NHL2	446 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	VSTM2B	A6NLU5	285 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	IDS	B3KWA1	339 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	ATP5L	O75964	103 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	DIRAS1	O95057	198 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGHG4	P01861	327 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	GIG44	P09565	113 aa	Predicted RBP	4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	PCMT1	P22061	227 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	GNA11	P29992	359 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	EPS15	P42566	896 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	ASPH	Q12797	758 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	DDX39B	Q13838	428 aa	Known RBP	4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	KLHL38	Q2WGJ6	581 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	RUFY3	Q7L099	469 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	TMEM179B	Q7Z7N9	219 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	TGIF2LX	Q8IUE1	241 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	TRPV1	Q8NER1	839 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	SLC38A2	Q96QD8	506 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	GAL3ST1	Q99999	423 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	NICN1	Q9BSH3	213 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	SLITRK2	Q9H156	845 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	ADAM28	Q9UKQ2	775 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130	MMP24	Q9Y5R2	645 aa		4.17	□□□□□ -1.74
LINC01088-209	ENST00000512130		H0Y8G0	127 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	HAT1	O14929	419 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	TIMM8A	O60220	97 aa	Predicted RBP	4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	FCMR	O60667	390 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGKV3-15	P01624	115 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	IGHV3-23	P01764	117 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130		P0C879	139 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	KLK2	P20151	261 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	CALCR	P30988	508 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	SULT1E1	P49888	294 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	RPL23A	P62750	156 aa	Known RBP	4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	PDZK1	Q5T2W1	519 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	HSDL2	Q6YN16	418 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	ACOT7L	Q6ZUV0	252 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	C14orf178	Q8N769	122 aa	Predicted RBP	4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	OR56B4	Q8NH76	319 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	ST8SIA1	Q92185	356 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	UBE2E3	Q969T4	207 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	CXorf40B	Q96DE9	158 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	GON7	Q9BXV9	100 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	REEP4	Q9H6H4	257 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	HYPK	Q9NX55	129 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	SEC14L3	Q9UDX4	400 aa		4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	RRP15	Q9Y3B9	282 aa	Known RBP	4.16	□□□□□ -1.74
LINC01088-209	ENST00000512130	ABCA7	Q8IZY2	2146 aa		4.15	□□□□□ -1.74
LINC01088-209	ENST00000512130	IQANK1	A0A1B0GTG1	560 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	SNTN	A6NMZ2	147 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130		A8MXQ7	604 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	UGT1A9	O60656	530 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	SNX4	O95219	450 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	CLDN9	O95484	217 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	HSPB1	P04792	205 aa	Known RBP	4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	NCF2	P19878	526 aa	Predicted RBP	4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	HTR1F	P30939	366 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	CCR1	P32246	355 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	RFC4	P35249	363 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	RGR	P47804	291 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	CDH4	P55283	916 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	ATP5I	P56385	69 aa	Predicted RBP	4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	ZNF45	Q02386	682 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	KLRB1	Q12918	225 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	SLC15A2	Q16348	729 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	EOGT	Q5NDL2	527 aa		4.15	□□□□□ -1.75
LINC01088-209	ENST00000512130	SAMD4B	Q5PRF9	694 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms