RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CHST2Q9Y4C5 530 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 TEP1Q99973 2627 aaKnown RBP11.81□□□□□ -0.52
RNF4-215ENST00000511843 DSCAMO60469 2012 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 F8P00451 2351 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 A0A0G2JND7 137 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 CDHR4A6H8M9 788 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 CFAP73A6NFT4 308 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 ZNF814B7Z6K7 855 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 FRS3O43559 492 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 CYTIPO60759 359 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 RAMP1O60894 148 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 THBDP07204 575 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 YES1P07947 543 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 PABPC4LP0CB38 370 aaKnown RBP11.81□□□□□ -0.52
RNF4-215ENST00000511843 ATP4BP51164 291 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 HOXC5Q00444 222 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 GNA13Q14344 377 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 ALKBH2Q6NS38 261 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 TMPPEQ6ZT21 453 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 CCDC103Q8IW40 242 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 CADM2Q8N3J6 435 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 NFKBIDQ8NI38 313 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 SLC25A43Q8WUT9 341 aaPredicted RBP11.81□□□□□ -0.52
RNF4-215ENST00000511843 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 ZNF385DQ9H6B1 395 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 A4GALTQ9NPC4 353 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 CALML5Q9NZT1 146 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.81□□□□□ -0.52
RNF4-215ENST00000511843 PRSS50Q9UI38 385 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 HIVEP1P15822 2718 aa11.81□□□□□ -0.52
RNF4-215ENST00000511843 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
RNF4-215ENST00000511843 TRBV5-3A0A0A0MS03 114 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 A0A0G2JPF8 293 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 HNRNPCL2B2RXH8 293 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 HNRNPCL3B7ZW38 293 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 HNRNPCL1O60812 293 aaKnown RBP11.8□□□□□ -0.52
RNF4-215ENST00000511843 GCM2O75603 506 aaPredicted RBP11.8□□□□□ -0.52
RNF4-215ENST00000511843 HNRNPCL4P0DMR1 293 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 CRYGSP22914 178 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 ACAA2P42765 397 aaKnown RBP11.8□□□□□ -0.52
RNF4-215ENST00000511843 MAGEA8P43361 318 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 PCYT1AP49585 367 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 POLR2HP52434 150 aaKnown RBP11.8□□□□□ -0.52
RNF4-215ENST00000511843 OR2B6P58173 313 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 BNIP2Q12982 314 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 GCNT6Q5T4J0 391 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 ABLIM2Q6H8Q1 611 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 PAMR1Q6UXH9 720 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 BEND4Q6ZU67 534 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 SERPINA11Q86U17 422 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 STK32CQ86UX6 486 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 RETREG3Q86VR2 466 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 COMTD1Q86VU5 262 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 SLC43A2Q8N370 569 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 FGFR1OP2Q9NVK5 253 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 ZNF226Q9NYT6 803 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 KLHL9Q9P2J3 617 aa11.8□□□□□ -0.52
RNF4-215ENST00000511843 SPIN1Q9Y657 262 aaPredicted RBP11.8□□□□□ -0.52
RNF4-215ENST00000511843 TMEM247A6NEH6 219 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 C5orf58C9J3I9 102 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 ATE1O95260 518 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 PGM3O95394 542 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 PMS2P2O95744 297 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 ADAP00813 363 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 IGHV3-9P01782 118 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 THBS1P07996 1170 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 ARAFP10398 606 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 IMPDH2P12268 514 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 BMP2P12643 396 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 DNASE1P24855 282 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 LOXP28300 417 aaPredicted RBP11.79□□□□□ -0.52
RNF4-215ENST00000511843 AQP1P29972 269 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 SLC1A3P43003 542 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 CSNK2A1P68400 391 aaPredicted RBP11.79□□□□□ -0.52
RNF4-215ENST00000511843 FADDQ13158 208 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 SELPLGQ14242 412 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 LARS2Q15031 903 aaKnown RBP11.79□□□□□ -0.52
RNF4-215ENST00000511843 ZNF311Q5JNZ3 666 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 RNF220Q5VTB9 566 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 CGB2Q6NT52 195 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 DLEU7Q6UYE1 221 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 MTDHQ86UE4 582 aaKnown RBP11.79□□□□□ -0.52
RNF4-215ENST00000511843 WFDC8Q8IUA0 241 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 GABRG1Q8N1C3 465 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 BBS10Q8TAM1 723 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 PMM1Q92871 262 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 S100PBPQ96BU1 408 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 CPPED1Q9BRF8 314 aaPredicted RBP11.79□□□□□ -0.52
RNF4-215ENST00000511843 SPATA9Q9BWV2 254 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 TMEM120AQ9BXJ8 343 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 ACTR6Q9GZN1 396 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 RAD21L1Q9H4I0 556 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 BCO1Q9HAY6 547 aa11.79□□□□□ -0.52
RNF4-215ENST00000511843 A0A1W2PP18 115 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 ZNF716A6NP11 495 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 FAAHO00519 579 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 KLF4O43474 513 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 TPST1O60507 370 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 RAF1P04049 648 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms