RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CXCL3P19876 107 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
USP38-202ENST00000510377 RALGAPA2Q2PPJ7 1873 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 BEX5Q5H9J7 111 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
USP38-202ENST00000510377 ZNF793Q6ZN11 406 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 CFAP77Q6ZQR2 320 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 KCTD9Q7L273 389 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 OR5J2Q8NH18 312 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
USP38-202ENST00000510377 SFXN2Q96NB2 322 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 TOX2Q96NM4 488 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 C1QTNF6Q9BXI9 259 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 C20orf85Q9H1P6 137 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 ATG5Q9H1Y0 275 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 OR52A5Q9H2C5 316 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 SLC38A1Q9H2H9 487 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.82□□□□□ -0.2
USP38-202ENST00000510377 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.82□□□□□ -0.2
USP38-202ENST00000510377 OR14I1A6ND48 311 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 MAN2B1O00754 1011 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 OR8G3PP0DMU2 310 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 FGF9P31371 208 aaPredicted RBP13.82□□□□□ -0.2
USP38-202ENST00000510377 PER3P56645 1201 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 ACTA2P62736 377 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 ACTG2P63267 376 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 LHX8Q68G74 356 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 RPL13AP3Q6NVV1 102 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 ARSKQ6UWY0 536 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 ZNF836Q6ZNA1 936 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 TAF8Q7Z7C8 310 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.82□□□□□ -0.2
USP38-202ENST00000510377 ORAI3Q9BRQ5 295 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 MARVELD1Q9BSK0 173 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 TRIM2Q9C040 744 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 FBXL4Q9UKA2 621 aa13.82□□□□□ -0.2
USP38-202ENST00000510377 KANTRA0A1W2PQU2 76 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 SERTM1A2A2V5 107 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 TP53P04637 393 aaPredicted RBP13.81□□□□□ -0.2
USP38-202ENST00000510377 SBK2P0C263 348 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 ERVK-21P61565 698 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 SQSTM1Q13501 440 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 SLC48A1Q6P1K1 146 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 TEX261Q6UWH6 196 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 TPRA1Q86W33 373 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 ZNF547Q8IVP9 402 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 BRIX1Q8TDN6 353 aaKnown RBP13.81□□□□□ -0.2
USP38-202ENST00000510377 ASB12Q8WXK4 309 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 SLC22A18Q96BI1 424 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 DERL3Q96Q80 235 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 DHRS9Q9BPW9 319 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 NUP50Q9UKX7 468 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 CA5BQ9Y2D0 317 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 PPIL1Q9Y3C6 166 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 U3KQ87 197 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 SYT5O00445 386 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 HTR4Q13639 388 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 CST6Q15828 149 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 CD276Q5ZPR3 534 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 NIPAL3Q6P499 406 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 PDZD9Q8IXQ8 264 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 ZNF619Q8N2I2 560 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 OR52I2Q8NH67 350 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 NMNAT3Q96T66 252 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 SLC6A15Q9H2J7 730 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 C6orf106Q9H6K1 298 aaPredicted RBP13.81□□□□□ -0.2
USP38-202ENST00000510377 RXFP3Q9NSD7 469 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 CENPMQ9NSP4 180 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 RGS11O94810 467 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 C21orf58P58505 322 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 ARMC10Q8N2F6 343 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 OR7G2Q8NG99 324 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 SFXN5Q8TD22 340 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 GSX2Q9BZM3 304 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 ELL3Q9HB65 397 aaPredicted RBP13.81□□□□□ -0.2
USP38-202ENST00000510377 MBNL1Q9NR56 388 aaKnown RBP13.81□□□□□ -0.2
USP38-202ENST00000510377 MED17Q9NVC6 651 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 CBLCQ9ULV8 474 aa13.81□□□□□ -0.2
USP38-202ENST00000510377 NPIPB8E9PQR5 432 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 NDUFB2O95178 105 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 NPR2P20594 1047 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 MAGEB1P43366 347 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 FGL2Q14314 439 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 IRF4Q15306 451 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 MFSD12Q6NUT3 480 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 FOXRED2Q8IWF2 684 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 RBPMSQ93062 196 aaKnown RBP13.8□□□□□ -0.2
USP38-202ENST00000510377 SPACA7Q96KW9 195 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 SEMA4CQ9C0C4 833 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 ZNF436Q9C0F3 470 aaPredicted RBP13.8□□□□□ -0.2
USP38-202ENST00000510377 Q9N2J8 555 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 CDC42EP2O14613 210 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 KAT7O95251 611 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 CD2P06729 351 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 NRG3P56975 720 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 TRA2BP62995 288 aaKnown RBP13.8□□□□□ -0.2
USP38-202ENST00000510377 SIRPAP78324 504 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 OTPQ5XKR4 325 aa13.8□□□□□ -0.2
USP38-202ENST00000510377 RAB12Q6IQ22 244 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms