RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 HPCAP84074 193 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 CHRNEQ04844 493 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 GPAT3Q53EU6 434 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 GRINAQ7Z429 371 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 GALNT5Q7Z7M9 940 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 MTDHQ86UE4 582 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 KBTBD8Q8NFY9 601 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 DNAJA3Q96EY1 480 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 TRIM2Q9C040 744 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 OR11A1Q9GZK7 315 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 SLC38A1Q9H2H9 487 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 KCNK9Q9NPC2 374 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 NPAP1Q9NZP6 1156 aa11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 SPIN1Q9Y657 262 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-205ENST00000508319 ATRQ13535 2644 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 CCDC154A6NI56 674 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 AP3D1O14617 1153 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 PMS2P2O95744 297 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 PGRP06401 933 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 RPS4Y1P22090 263 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 WDR4P57081 412 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 PDK3Q15120 406 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 STK11Q15831 433 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 SYPL1Q16563 259 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 ADGRG3Q86Y34 549 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 ARFGAP2Q8N6H7 521 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 ANKFN1Q8N957 763 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 ZNF563Q8TA94 476 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 CNOT9Q92600 299 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 TRNT1Q96Q11 434 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 INPP5KQ9BT40 448 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 EMC3Q9P0I2 261 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 HDGFL3Q9Y3E1 203 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 MAGED1Q9Y5V3 778 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 GPR45Q9Y5Y3 372 aa11.49□□□□□ -0.57
HMGCS1-205ENST00000508319 CR1P17927 2039 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 AGAP5A6NIR3 686 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 OR5H1A6NKK0 313 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 DNPH1O43598 174 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 RAMP1O60894 148 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 SNNO75324 88 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 TFPIP10646 304 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 GGT1P19440 569 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 EPHA3P29320 983 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 NTF4P34130 210 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 IDH2P48735 452 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 SLC16A1P53985 500 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 PPA1Q15181 289 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 PGGHGQ32M88 737 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 COX20Q5RI15 118 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 TIMM23BQ5SRD1 257 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 CMIPQ8IY22 773 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 ZNF100Q8IYN0 542 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 TRIML2Q8N7C3 387 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 ZNF433Q8N7K0 673 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 ANKRD42Q8N9B4 389 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 PIGXQ8TBF5 258 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 SMAP2Q8WU79 429 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 ZHX1-C8orf76Q96EF9 292 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 PANX1Q96RD7 426 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 PAIP2Q9BPZ3 127 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 WDR55Q9H6Y2 383 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 MALT1Q9UDY8 824 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 LIPT1Q9Y234 373 aa11.48□□□□□ -0.57
HMGCS1-205ENST00000508319 ABCA1O95477 2261 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 TMEM120BA0PK00 339 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 SHISA9B4DS77 424 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 HDAC3O15379 428 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 ZNF500O60304 480 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 PGM3O95394 542 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 IGHV3-9P01782 118 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 GSNP06396 782 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 THBS1P07996 1170 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 PCSK6P29122 969 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 CDKN1AP38936 164 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 CLK1P49759 484 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 TXNL4AP83876 142 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 H3F3AP84243 136 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 KRTAP1-1Q07627 177 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 TNK1Q13470 666 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 MAPK11Q15759 364 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 HHATQ5VTY9 493 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 FBXW9Q5XUX1 488 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 DNAJC14Q6Y2X3 702 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 LRRC74BQ6ZQY2 392 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 SPATA19Q7Z5L4 167 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 P2RY8Q86VZ1 359 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 CCDC103Q8IW40 242 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 PNPT1Q8TCS8 783 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 APH1AQ96BI3 265 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 OR52E6Q96RD3 313 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 SLC6A13Q9NSD5 602 aa11.47□□□□□ -0.57
HMGCS1-205ENST00000508319 THAP1Q9NVV9 213 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms