RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ARMC7Q9H6L4 198 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 EXOSC3Q9NQT5 275 aaKnown RBP8.37□□□□□ -1.07
DDX41-209ENST00000508279 PLSCR4Q9NRQ2 329 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 KLHL9Q9P2J3 617 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 KLHL13Q9P2N7 655 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 LEF1Q9UJU2 399 aaPredicted RBP8.37□□□□□ -1.07
DDX41-209ENST00000508279 PLEKHA6Q9Y2H5 1048 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 NDUFAF1Q9Y375 327 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 CSMD2Q7Z408 3487 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 MYO9AB2RTY4 2548 aa8.37□□□□□ -1.07
DDX41-209ENST00000508279 A0A1W2PP18 115 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 CDHR4A6H8M9 788 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 SMAD9O15198 467 aaKnown RBP8.36□□□□□ -1.07
DDX41-209ENST00000508279 DNAJA2O60884 412 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 YES1P07947 543 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 PRG2P13727 222 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 PPIBP23284 216 aaKnown RBP8.36□□□□□ -1.07
DDX41-209ENST00000508279 CXCR1P25024 350 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 AQP1P29972 269 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 DNAJA1P31689 397 aaKnown RBP8.36□□□□□ -1.07
DDX41-209ENST00000508279 CCKARP32238 428 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 MAGEA8P43361 318 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 HTR3AP46098 478 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 ARFIP2P53365 341 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 HOXC5Q00444 222 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 BNIP2Q12982 314 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 NFYCQ13952 458 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 DAZAP2Q15038 168 aaPredicted RBP8.36□□□□□ -1.07
DDX41-209ENST00000508279 TSC22D1Q15714 1073 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 LRIF1Q5T3J3 769 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 BEND4Q6ZU67 534 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 DHDDSQ86SQ9 333 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 SERPINA11Q86U17 422 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 CXorf67Q86X51 503 aaPredicted RBP8.36□□□□□ -1.07
DDX41-209ENST00000508279 ZNF440Q8IYI8 595 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 C10orf111Q8N326 155 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 SLC43A2Q8N370 569 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 BBS10Q8TAM1 723 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 RNF217Q8TC41 542 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 DDIT4LQ96D03 193 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 PIK3IP1Q96FE7 263 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 SIKE1Q9BRV8 207 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 IKZF5Q9H5V7 419 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 A4GALTQ9NPC4 353 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 FANCFQ9NPI8 374 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 SLC52A3Q9NQ40 469 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 ZNF226Q9NYT6 803 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 OSGIN1Q9UJX0 560 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 IFT52Q9Y366 437 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 TESMINQ9Y4I5 508 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 CCDC168Q8NDH2 2452 aa8.36□□□□□ -1.07
DDX41-209ENST00000508279 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
DDX41-209ENST00000508279 CSMD1Q96PZ7 3565 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 DSPPQ9NZW4 1301 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 ZC3H12DA2A288 527 aaKnown RBP8.35□□□□□ -1.07
DDX41-209ENST00000508279 ETV2O00321 342 aaPredicted RBP8.35□□□□□ -1.07
DDX41-209ENST00000508279 CYTIPO60759 359 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 PGM3O95394 542 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 THBS1P07996 1170 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 ARAFP10398 606 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 HOXB9P17482 250 aaPredicted RBP8.35□□□□□ -1.07
DDX41-209ENST00000508279 SLC6A2P23975 617 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 SLC1A3P43003 542 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 ART1P52961 327 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 IST1P53990 364 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 MTPNP58546 118 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 IRX1P78414 480 aaPredicted RBP8.35□□□□□ -1.07
DDX41-209ENST00000508279 CDK6Q00534 326 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 SCARB2Q14108 478 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 CAPRIN1Q14444 709 aaKnown RBP8.35□□□□□ -1.07
DDX41-209ENST00000508279 CYP51A1Q16850 503 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 MMEL1Q495T6 779 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 AP1ARQ63HQ0 302 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 REEP3Q6NUK4 255 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 DLEU7Q6UYE1 221 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 TFAP2EQ6VUC0 442 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 KRT73Q86Y46 540 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 WFDC8Q8IUA0 241 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 CCDC103Q8IW40 242 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 PMM1Q92871 262 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 PSD2Q9BQI7 771 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 CPPED1Q9BRF8 314 aaPredicted RBP8.35□□□□□ -1.07
DDX41-209ENST00000508279 SPATA9Q9BWV2 254 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 PIF1Q9H611 641 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 ZNF385DQ9H6B1 395 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 CCM2LQ9NUG4 571 aaPredicted RBP8.35□□□□□ -1.07
DDX41-209ENST00000508279 TMEM181Q9P2C4 612 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 RPS6KB2Q9UBS0 482 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 PRSS50Q9UI38 385 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 SLC13A4Q9UKG4 626 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 CORO2BQ9UQ03 480 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 HDGFL3Q9Y3E1 203 aa8.35□□□□□ -1.07
DDX41-209ENST00000508279 FAM221AA4D161 298 aa8.34□□□□□ -1.07
DDX41-209ENST00000508279 PMS2P2O95744 297 aa8.34□□□□□ -1.07
DDX41-209ENST00000508279 ADAP00813 363 aa8.34□□□□□ -1.07
DDX41-209ENST00000508279 IGHV3-9P01782 118 aa8.34□□□□□ -1.07
DDX41-209ENST00000508279 HRGP04196 525 aa8.34□□□□□ -1.07
DDX41-209ENST00000508279 BMP2P12643 396 aa8.34□□□□□ -1.07
DDX41-209ENST00000508279 FPR1P21462 350 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms