RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ZNF853P0CG23 659 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 RBMY1CP0DJD4 496 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 IMPDH1P20839 514 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 PRPHP41219 470 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 RGRP47804 291 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 TDO2P48775 406 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 SLC26A2P50443 739 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 HNRNPA3P51991 378 aaKnown RBP2.4□□□□□ -2.03
LSM6-205ENST00000507449 EFNB2P52799 333 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 SLC10A7Q0GE19 358 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 KLRB1Q12918 225 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 MESDQ14696 234 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 PDK3Q15120 406 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 KYAT1Q16773 422 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 NSUN5P1Q3KNT7 163 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 SFT2D3Q587I9 215 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 C1orf220Q5T0J3 134 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 BEND3Q5T5X7 828 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 OR4F3Q6IEY1 312 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 CENPPQ6IPU0 288 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 WDR74Q6RFH5 385 aaPredicted RBP2.4□□□□□ -2.03
LSM6-205ENST00000507449 ACOT7LQ6ZUV0 252 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 TMEM179BQ7Z7N9 219 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 MTURNQ8N3F0 131 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 MFSD9Q8NBP5 474 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 OR52I1Q8NGK6 324 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 OR5D13Q8NGL4 314 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 OR8J1Q8NGP2 316 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 FBXO30Q8TB52 745 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 TCTEX1D2Q8WW35 142 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 MRPS31Q92665 395 aaKnown RBP2.4□□□□□ -2.03
LSM6-205ENST00000507449 FRAT1Q92837 279 aaPredicted RBP2.4□□□□□ -2.03
LSM6-205ENST00000507449 SLC38A2Q96QD8 506 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 GAL3ST1Q99999 423 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 TUBGCP2Q9BSJ2 902 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 TMEM43Q9BTV4 400 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 GON7Q9BXV9 100 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 CAPS2Q9BXY5 557 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 MARCH5Q9NX47 278 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 EXTL2Q9UBQ6 330 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 CLEC4AQ9UMR7 237 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 CLSPNQ9HAW4 1339 aa2.4□□□□□ -2.03
LSM6-205ENST00000507449 TNRQ92752 1358 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 F5H6K3 240 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 DCTN6O00399 190 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 NBR2O15453 112 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 RIPK2O43353 540 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 PFKFB2O60825 505 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 RAMP3O60896 148 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 N4BP1O75113 896 aaKnown RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 SURF6O75683 361 aaKnown RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 STAMBPO95630 424 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 IL1BP01584 269 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 LGALS2P05162 132 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 DUX4L4P0CJ87 422 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 POU2F1P14859 743 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 COX5AP20674 150 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 GCAP28676 217 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 HTR1FP30939 366 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 NTSP30990 170 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 YWHABP31946 246 aaKnown RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 GRIA1P42261 906 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 QARSP47897 775 aaKnown RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 DUSP3P51452 185 aaPredicted RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 LYZP61626 148 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 GNB2P62879 340 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 CHRNB3Q05901 458 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 KLRC3Q07444 240 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 CCDC173Q0VFZ6 552 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 VGLL4Q14135 290 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 HERPUD1Q15011 391 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 CCDC14Q49A88 953 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 CARD16Q5EG05 197 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 KLF17Q5JT82 389 aaPredicted RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 PDZK1Q5T2W1 519 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 PMF1Q6P1K2 205 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 Q6ZPB1 254 aaPredicted RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 TMEM110Q86TL2 294 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 NRMQ8IXM6 262 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 SLC35F2Q8IXU6 374 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 LRRC75A-AS1Q8N1F1 130 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 C6orf223Q8N319 242 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 ZNF606Q8WXB4 792 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 OR1E3Q8WZA6 343 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 RAPGEF5Q92565 580 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 MAGEB18Q96M61 343 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 SMIM14Q96QK8 99 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 NICN1Q9BSH3 213 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 DCDC2Q9UHG0 476 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 PRPF19Q9UMS4 504 aaKnown RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 ZNF256Q9Y2P7 627 aaPredicted RBP2.39□□□□□ -2.03
LSM6-205ENST00000507449 UGT2A1Q9Y4X1 527 aa2.39□□□□□ -2.03
LSM6-205ENST00000507449 PNPLA6Q8IY17 1366 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 CLRN2A0PK11 232 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 A8MU10 97 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 IDSB3KWA1 339 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 PANO1I0J062 215 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 GFYI3L273 518 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 RGS16O15492 202 aaPredicted RBP2.38□□□□□ -2.03
LSM6-205ENST00000507449 ZNF208O43345 1280 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms