RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF716A6NP11 495 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 K7EIL1 84 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 KIF2AO00139 706 aaPredicted RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 GTPBP1O00178 669 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 SCDO00767 359 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 OIP5O43482 229 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 RP2O75695 350 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 KRT33AO76009 404 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 NCR1O76036 304 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 H6PDO95479 791 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 CELA3BP08861 270 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 ALOX5P09917 674 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 MYZAPP0CAP1 466 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 IGHV4-38-2P0DP08 117 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 TFPIP10646 304 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 CSNK2A1P68400 391 aaPredicted RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 MRPS11P82912 194 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 ZNF154Q13106 437 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 TBX2Q13207 712 aaPredicted RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 SELENBP1Q13228 472 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 SNTB2Q13425 540 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 SLC29A2Q14542 456 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 PDK3Q15120 406 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 CD226Q15762 336 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 DEFB112Q30KQ8 113 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 NRN1LQ496H8 165 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 GLIPR1L2Q4G1C9 344 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 C1QTNF12Q5T7M4 302 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 TRMT10BQ6PF06 316 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 TMEM107Q6UX40 140 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 TMPPEQ6ZT21 453 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 ZC3HC1Q86WB0 502 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 CNGA4Q8IV77 575 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 CCDC170Q8IYT3 715 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 MMGT1Q8N4V1 131 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 PHOSPHO1Q8TCT1 267 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 ST7LQ8TDW4 575 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 ATP6V1E2Q96A05 226 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 ITPKCQ96DU7 683 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 RBMXL1Q96E39 390 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 SLC47A1Q96FL8 570 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 MARS2Q96GW9 593 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 GAL3ST1Q99999 423 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 CHIAQ9BZP6 476 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 TRIM5Q9C035 493 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 QRSL1Q9H0R6 528 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 ALG9Q9H6U8 611 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 CAB39LQ9H9S4 337 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 OBP2BQ9NPH6 170 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 EQTNQ9NQ60 294 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 SIRT3Q9NTG7 399 aaPredicted RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 LEF1Q9UJU2 399 aaPredicted RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 PURGQ9UJV8 347 aaKnown RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 SLC12A4Q9UP95 1085 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 CARD8Q9Y2G2 431 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 WIPI2Q9Y4P8 454 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 GPC6Q9Y625 555 aaPredicted RBP6.14□□□□□ -1.43
VCAN-207ENST00000507162 IGHV2OR16-5A0A0B4J2B6 119 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 SRRM5B3KS81 715 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 UBXN8O00124 270 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 UPK1AO00322 258 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 TPD52L2O43399 206 aaKnown RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 CBFA2T2O43439 604 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 ICMTO60725 284 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 FOXH1O75593 365 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 IPO7O95373 1038 aaKnown RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 LGI1O95970 557 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 JUNP05412 331 aaKnown RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 IL3P08700 152 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 FAM157BP0CG42 384 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 PRKCAP17252 672 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 MAGEA3P43357 314 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 MAGEA8P43361 318 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 MAGEB1P43366 347 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 NCBP2P52298 156 aaKnown RBP eCLIP6.13□□□□□ -1.43
VCAN-207ENST00000507162 ATP6V0D1P61421 351 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 CCL8P80075 99 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 POU3F1Q03052 451 aaPredicted RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 ZNF117Q03924 483 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 NPRL3Q12980 569 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 IFT88Q13099 833 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 KLHL22Q53GT1 634 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 DMRTC1Q5HYR2 192 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 RNASEH2BQ5TBB1 312 aaKnown RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 FOXB2Q5VYV0 432 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 CBLN3Q6UW01 205 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 ZAR1Q86SH2 424 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 LRP11Q86VZ4 500 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 ADGRG3Q86Y34 549 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 MISPQ8IVT2 679 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 IGDCC3Q8IVU1 814 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 VSTM4Q8IW00 320 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 SAMD14Q8IZD0 417 aaPredicted RBP6.13□□□□□ -1.43
VCAN-207ENST00000507162 GPR119Q8TDV5 335 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 RAB1CQ92928 201 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 PHF21AQ96BD5 680 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 ZNF524Q96C55 264 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 ZHX1-C8orf76Q96EF9 292 aa6.13□□□□□ -1.43
VCAN-207ENST00000507162 AURKBQ96GD4 344 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms