RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 COA1Q9GZY4 146 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 NAA50Q9GZZ1 169 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 NXF5Q9H1B4 397 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ZBTB26Q9HCK0 441 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 LHX6Q9UPM6 363 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 USP3Q9Y6I4 520 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 V9GYY9 64 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 A8MVM7 634 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 HACD1B0YJ81 288 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 AZIN1O14977 448 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CTDSPLO15194 276 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 SPINT1O43278 529 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GPR37L1O60883 481 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 AKAIN1P0CW23 69 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CTSKP43235 329 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 RFX2P48378 723 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CRYBA4P53673 196 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 OR10A3P58181 314 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 PTENP60484 403 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GAMTQ14353 236 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GABRA6Q16445 453 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 UPP1Q16831 310 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 UQCC3Q6UW78 93 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 BIVMQ86UB2 503 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GID4Q8IVV7 300 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 MS4A15Q8N5U1 240 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 TCTEX1D1Q8N7M0 179 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 PLA2G15Q8NCC3 412 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 OR2AK2Q8NG84 335 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF385AQ96PM9 386 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CIB3Q96Q77 187 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 TAAR9Q96RI9 348 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 DERL1Q9BUN8 251 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 HSD3B7Q9H2F3 369 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 KCNIP1Q9NZI2 227 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 FAM198AQ9UFP1 575 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 EXOSC1Q9Y3B2 195 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ENTPD3O75355 529 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ACTL6BO94805 426 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 DIRAS1O95057 198 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GJB5O95377 273 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 TFP02787 698 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 OR2T7P0C7T2 308 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 TBPP20226 339 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 DUSP1P28562 367 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 HOXA6P31267 233 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CNTN2Q02246 1040 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GUCA2AQ02747 115 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CDH18Q13634 790 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CXXC5Q7LFL8 322 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 SLC16A14Q7RTX9 510 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CPEB2Q7Z5Q1 589 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 RNF113BQ8IZP6 322 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 NECAP1Q8NC96 275 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 OR52E1Q8NGJ3 308 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ARRDC3Q96B67 414 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 LGALS12Q96DT0 336 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 RAB1BQ9H0U4 201 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 RASL12Q9NYN1 266 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 PCYOX1Q9UHG3 505 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CAMTA1Q9Y6Y1 1673 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 DHRS12A0PJE2 317 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 BLOC1S5-TXNDC5H3BN57 136 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GH1P01241 217 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 MT-ND4LP03901 98 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF30P17039 623 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CSNK2A2P19784 350 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 GAGE1Q13065 139 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 SLC16A12Q6ZSM3 486 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 OVCH2Q7RTZ1 564 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 PUSL1Q8N0Z8 303 aaKnown RBP5.85□□□□□ -1.47
CLCN3-204ENST00000504131 OR6V1Q8N148 313 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ASB10Q8WXI3 467 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 CD101Q93033 1021 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 ZFP3Q96NJ6 502 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 EMC7Q9NPA0 242 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 AK3Q9UIJ7 227 aa5.85□□□□□ -1.47
CLCN3-204ENST00000504131 A0A0G2JMP0 313 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 FAM74A7A6NL05 159 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 ESR1P03372 595 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 CHRM2P08172 466 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 CCL2P13500 99 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 FAUP35544 74 aaKnown RBP5.84□□□□□ -1.47
CLCN3-204ENST00000504131 PTH2RP49190 550 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF84P51523 738 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 TAS2R43P59537 309 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 EGR3Q06889 387 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 SRSF6Q13247 344 aaKnown RBP5.84□□□□□ -1.47
CLCN3-204ENST00000504131 FAM74A3Q4VXF1 159 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 OR2A2Q6IF42 318 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 RNF165Q6ZSG1 346 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 APTXQ7Z2E3 356 aaKnown RBP5.84□□□□□ -1.47
CLCN3-204ENST00000504131 WDR53Q7Z5U6 358 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-204ENST00000504131 AQP11Q8NBQ7 271 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 OR4M2Q8NGB6 313 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 MALSU1Q96EH3 234 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 OSGEPQ9NPF4 335 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 KLRF1Q9NZS2 232 aa5.84□□□□□ -1.47
CLCN3-204ENST00000504131 METTL1Q9UBP6 276 aaKnown RBP5.84□□□□□ -1.47
CLCN3-204ENST00000504131 TUBD1Q9UJT1 453 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms