RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CT45A2Q5DJT8 189 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 HBMQ6B0K9 141 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 MZT2BQ6NZ67 158 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 KIRREL2Q6UWL6 708 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 NPSR1Q6W5P4 371 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 DPY19L2P2Q6ZN68 376 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 NRARPQ7Z6K4 114 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 SIX5Q8N196 739 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 SYS1Q8N2H4 156 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 TMEM99Q8N816 258 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 BCORP1Q8N888 145 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 OR51Q1Q8NH59 317 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 C16orf52Q8NHV5 167 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 SMPDL3BQ92485 455 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 PTCHD1Q96NR3 888 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 DEPDC7Q96QD5 511 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 OR1F2PQ96R84 312 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 CNN2Q99439 309 aaKnown RBP11.02□□□□□ -0.65
NUP54-202ENST00000502850 OR51V1Q9H2C8 321 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 MCCC2Q9HCC0 563 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 ENAMQ9NRM1 1142 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 COMMD3Q9UBI1 195 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 SLC6A5Q9Y345 797 aa11.02□□□□□ -0.65
NUP54-202ENST00000502850 COL5A1P20908 1838 aaPredicted RBP11.01□□□□□ -0.65
NUP54-202ENST00000502850 CD8B2A6NJW9 211 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 LMO7DNF2Z398 122 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 TGFBR3LH3BV60 316 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 ARPC3O15145 178 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
NUP54-202ENST00000502850 CD1AP06126 327 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 CSF3P09919 207 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 OR2T7P0C7T2 308 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 CD8BP10966 210 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 SLC2A2P11168 524 aaPredicted RBP11.01□□□□□ -0.65
NUP54-202ENST00000502850 HPGDP15428 266 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 FUT1P19526 365 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 GABRA4P48169 554 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 FNTBP49356 437 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 PGDP52209 483 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 SELENBP1Q13228 472 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 BAK1Q16611 211 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 VASNQ6EMK4 673 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 WBP2NLQ6ICG8 309 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 CNIH2Q6PI25 160 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 VASH1Q7L8A9 365 aaPredicted RBP11.01□□□□□ -0.65
NUP54-202ENST00000502850 UBQLNLQ8IYU4 475 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 TEX19Q8NA77 164 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 FAM98AQ8NCA5 519 aaKnown RBP11.01□□□□□ -0.65
NUP54-202ENST00000502850 OR4N2Q8NGD1 307 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 OR2T27Q8NH04 317 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 ENKURQ8TC29 256 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 HAVCR2Q8TDQ0 301 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 PTP4A1Q93096 173 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 SPACA7Q96KW9 195 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 SLC46A1Q96NT5 459 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 ERMAPQ96PL5 475 aaPredicted RBP11.01□□□□□ -0.65
NUP54-202ENST00000502850 TNFRSF13CQ96RJ3 184 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 PHOX2BQ99453 314 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 TTYH2Q9BSA4 534 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 MED20Q9H944 212 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 LMAN1LQ9HAT1 526 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 TIGARQ9NQ88 270 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 UBQLN4Q9NRR5 601 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 CHRNA9Q9UGM1 479 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 TDRD6O60522 2096 aaKnown RBP11.01□□□□□ -0.65
NUP54-202ENST00000502850 PIEZO1Q92508 2521 aa11.01□□□□□ -0.65
NUP54-202ENST00000502850 NUP210LQ5VU65 1888 aa11□□□□□ -0.65
NUP54-202ENST00000502850 RHPN2P1A8MT19 583 aa11□□□□□ -0.65
NUP54-202ENST00000502850 SCDO00767 359 aa11□□□□□ -0.65
NUP54-202ENST00000502850 RFPL3O75679 317 aa11□□□□□ -0.65
NUP54-202ENST00000502850 CDC123O75794 336 aaPredicted RBP11□□□□□ -0.65
NUP54-202ENST00000502850 PRKAR1AP10644 381 aa11□□□□□ -0.65
NUP54-202ENST00000502850 RORAP35398 523 aa11□□□□□ -0.65
NUP54-202ENST00000502850 TGM4P49221 684 aa11□□□□□ -0.65
NUP54-202ENST00000502850 INPP1P49441 399 aa11□□□□□ -0.65
NUP54-202ENST00000502850 EVX1P49640 407 aa11□□□□□ -0.65
NUP54-202ENST00000502850 GBX2P52951 348 aaPredicted RBP11□□□□□ -0.65
NUP54-202ENST00000502850 NRG3P56975 720 aa11□□□□□ -0.65
NUP54-202ENST00000502850 DCAF7P61962 342 aa11□□□□□ -0.65
NUP54-202ENST00000502850 IL10RAQ13651 578 aa11□□□□□ -0.65
NUP54-202ENST00000502850 C14orf28Q4W4Y0 310 aa11□□□□□ -0.65
NUP54-202ENST00000502850 ZMAT1Q5H9K5 638 aa11□□□□□ -0.65
NUP54-202ENST00000502850 ZC3H14Q6PJT7 736 aaKnown RBP11□□□□□ -0.65
NUP54-202ENST00000502850 OGFOD3Q6PK18 319 aa11□□□□□ -0.65
NUP54-202ENST00000502850 TMEM91Q6ZNR0 172 aa11□□□□□ -0.65
NUP54-202ENST00000502850 NUP54Q7Z3B4 507 aa11□□□□□ -0.65
NUP54-202ENST00000502850 LRRC28Q86X40 367 aaPredicted RBP11□□□□□ -0.65
NUP54-202ENST00000502850 FAM71CQ8NEG0 241 aa11□□□□□ -0.65
NUP54-202ENST00000502850 ATOH1Q92858 354 aaPredicted RBP11□□□□□ -0.65
NUP54-202ENST00000502850 ITFG2Q969R8 447 aa11□□□□□ -0.65
NUP54-202ENST00000502850 ZC3HAV1LQ96H79 300 aaKnown RBP11□□□□□ -0.65
NUP54-202ENST00000502850 ART5Q96L15 291 aa11□□□□□ -0.65
NUP54-202ENST00000502850 TGM7Q96PF1 710 aa11□□□□□ -0.65
NUP54-202ENST00000502850 UBL7Q96S82 380 aaPredicted RBP11□□□□□ -0.65
NUP54-202ENST00000502850 GPX7Q96SL4 187 aaPredicted RBP11□□□□□ -0.65
NUP54-202ENST00000502850 SOSTQ9BQB4 213 aa11□□□□□ -0.65
NUP54-202ENST00000502850 TMEM43Q9BTV4 400 aa11□□□□□ -0.65
NUP54-202ENST00000502850 MIR1-1HGQ9H1L0 117 aa11□□□□□ -0.65
NUP54-202ENST00000502850 ISG20L2Q9H9L3 353 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms