RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TMUB1Q9BVT8 246 aa14.3□□□□□ -0.12
NR1H3-227ENST00000498548 BCO1Q9HAY6 547 aa14.3□□□□□ -0.12
NR1H3-227ENST00000498548 FANCFQ9NPI8 374 aa14.3□□□□□ -0.12
NR1H3-227ENST00000498548 SLAMF8Q9P0V8 285 aa14.3□□□□□ -0.12
NR1H3-227ENST00000498548 OSGIN1Q9UJX0 560 aa14.3□□□□□ -0.12
NR1H3-227ENST00000498548 TMED7Q9Y3B3 224 aa14.3□□□□□ -0.12
NR1H3-227ENST00000498548 DSCAMO60469 2012 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 CLIC1O00299 241 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 NR5A2O00482 541 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 RAMP1O60894 148 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 TGDSO95455 350 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 PPP3CBP16298 524 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 PSMB1P20618 241 aaKnown RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 TACR3P29371 465 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 PPP2R2AP63151 447 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 CSNK2A1P68400 391 aaPredicted RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 EPS8Q12929 822 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 FOXD4Q12950 439 aaPredicted RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 GNA13Q14344 377 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 ACKR1Q16570 336 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 SFRP5Q5T4F7 317 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 MTDHQ86UE4 582 aaKnown RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 CCDC103Q8IW40 242 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 CMIPQ8IY22 773 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 CLIP4Q8N3C7 705 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 SLC25A43Q8WUT9 341 aaPredicted RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 MAL2Q969L2 176 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 PLPPR2Q96GM1 343 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 CCDC28BQ9BUN5 200 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 GP6Q9HCN6 339 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 INTS9Q9NV88 658 aaKnown RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 CCDC167Q9P0B6 97 aa14.29□□□□□ -0.12
NR1H3-227ENST00000498548 ZNF443Q9Y2A4 671 aaPredicted RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 SPIN1Q9Y657 262 aaPredicted RBP14.29□□□□□ -0.12
NR1H3-227ENST00000498548 ZC3H12DA2A288 527 aaKnown RBP14.28□□□□□ -0.12
NR1H3-227ENST00000498548 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 DYNC1I1O14576 645 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 IGHV3-9P01782 118 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 IMPDH2P12268 514 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 IL32P24001 234 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 OR3A2P47893 321 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 POLR2HP52434 150 aaKnown RBP14.28□□□□□ -0.12
NR1H3-227ENST00000498548 CRISP3P54108 245 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 RGNQ15493 299 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 BEX5Q5H9J7 111 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 PAGE3Q5JUK9 113 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 RAI1Q7Z5J4 1906 aaPredicted RBP14.28□□□□□ -0.12
NR1H3-227ENST00000498548 GOLGA6L1Q8N7Z2 621 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 WFDC11Q8NEX6 87 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 STEAP2Q8NFT2 490 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 CKAP2Q8WWK9 683 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 SPDL1Q96EA4 605 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 SLC25A37Q9NYZ2 338 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 HDGFL3Q9Y3E1 203 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 CHST2Q9Y4C5 530 aa14.28□□□□□ -0.12
NR1H3-227ENST00000498548 DSPPQ9NZW4 1301 aa14.27□□□□□ -0.12
NR1H3-227ENST00000498548 ZNF724A8MTY0 619 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 HMGB1P1B2RPK0 211 aaPredicted RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 LYZL6O75951 148 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 PMS2P2O95744 297 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 PRG2P13727 222 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 H2AFXP16104 143 aaPredicted RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 HOXB9P17482 250 aaPredicted RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 NTF4P34130 210 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 ACAA2P42765 397 aaKnown RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 SLC1A3P43003 542 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 HTR3AP46098 478 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 MRPL19P49406 292 aaKnown RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 BNIP2Q12982 314 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 LIN52Q52LA3 116 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 AGKQ53H12 422 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 ABLIM2Q6H8Q1 611 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 BLOC1S3Q6QNY0 202 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 BHLHA15Q7RTS1 189 aaPredicted RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 ATG4DQ86TL0 474 aaPredicted RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 MSRB3Q8IXL7 192 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF100Q8IYN0 542 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 C10orf111Q8N326 155 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 CADM2Q8N3J6 435 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 ZHX1-C8orf76Q96EF9 292 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 TACO1Q9BSH4 297 aaKnown RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 HDHD5Q9BXW7 423 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 SLC52A3Q9NQ40 469 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 BEX4Q9NWD9 120 aaPredicted RBP14.27□□□□□ -0.13
NR1H3-227ENST00000498548 CALML5Q9NZT1 146 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 TMEM181Q9P2C4 612 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 VPS13CQ709C8 3753 aa14.27□□□□□ -0.13
NR1H3-227ENST00000498548 A0A096LPI6 279 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 A0A0G2JPF8 293 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF716A6NP11 495 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 HNRNPCL2B2RXH8 293 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 HNRNPCL3B7ZW38 293 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 FRS3O43559 492 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 HNRNPCL1O60812 293 aaKnown RBP14.26□□□□□ -0.13
NR1H3-227ENST00000498548 SASH3O75995 380 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 HNRNPCL4P0DMR1 293 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 FPR1P21462 350 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 IGHV1-2P23083 117 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 HOXC12P31275 282 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms