RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 B4DSR2 109 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 hCG_2039718K7EN88 272 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 LILRA1O75019 489 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 KRT33AO76009 404 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 PMS2P2O95744 297 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 KRT16P08779 473 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 UBTFL6P0CB48 400 aaPredicted RBP10.15□□□□□ -0.78
CDK9-205ENST00000498339 SDC1P18827 310 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 PGCP20142 388 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 GIFP27352 417 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 RPL38P63173 70 aaKnown RBP10.15□□□□□ -0.78
CDK9-205ENST00000498339 DEFA6Q01524 100 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 SLC7A5Q01650 507 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 GPR68Q15743 365 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 ADIPOQQ15848 244 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 ZSWIM7Q19AV6 140 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 HIKESHIQ53FT3 197 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 TSPO2Q5TGU0 170 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 TRIM46Q7Z4K8 759 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 SVOPLQ8N434 492 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 FAM216AQ8WUB2 273 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 DCAKDQ8WVC6 231 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 NEU4Q8WWR8 484 aaPredicted RBP10.15□□□□□ -0.78
CDK9-205ENST00000498339 SLC38A2Q96QD8 506 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 CCT7Q99832 543 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 ACTRT3Q9BYD9 372 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 CDC42EP4Q9H3Q1 356 aaKnown RBP10.15□□□□□ -0.78
CDK9-205ENST00000498339 PLK3Q9H4B4 646 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 PARPBPQ9NWS1 579 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 C1orf109Q9NX04 203 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 CHRNA9Q9UGM1 479 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 GRIP1Q9Y3R0 1128 aa10.15□□□□□ -0.78
CDK9-205ENST00000498339 SH3PXD2BA1X283 911 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 SERINC4A6NH21 518 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 PDLIM1O00151 329 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 PDE5AO76074 875 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 CSTAP01040 98 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 SNRPAP09012 282 aaKnown RBP10.14□□□□□ -0.79
CDK9-205ENST00000498339 CCNA2P20248 432 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 MPGP29372 298 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 NTF4P34130 210 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 HPCAL1P37235 193 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 FRKP42685 505 aaPredicted RBP10.14□□□□□ -0.79
CDK9-205ENST00000498339 UBE2NP61088 152 aaKnown RBP10.14□□□□□ -0.79
CDK9-205ENST00000498339 IL1RL1Q01638 556 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 SKP2Q13309 424 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 EFNB3Q15768 340 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 CFAP157Q5JU67 520 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 ZCCHC24Q8N2G6 241 aaKnown RBP10.14□□□□□ -0.79
CDK9-205ENST00000498339 OR56A1Q8NGH5 318 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 OR5D16Q8NGK9 328 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 UBASH3BQ8TF42 649 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 ZNF764Q96H86 408 aaPredicted RBP10.14□□□□□ -0.79
CDK9-205ENST00000498339 ARL5BQ96KC2 179 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 JMJD8Q96S16 334 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 KATNB1Q9BVA0 655 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 CTPS2Q9NRF8 586 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 SIRT3Q9NTG7 399 aaPredicted RBP10.14□□□□□ -0.79
CDK9-205ENST00000498339 ACER3Q9NUN7 267 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 HIF1ANQ9NWT6 349 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 BAIAP2L1Q9UHR4 511 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 ZNF180Q9UJW8 692 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 FBXO9Q9UK97 447 aaPredicted RBP10.14□□□□□ -0.79
CDK9-205ENST00000498339 USP22Q9UPT9 525 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 FIS1Q9Y3D6 152 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 PTGDR2Q9Y5Y4 395 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 KCNE3Q9Y6H6 103 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 TGP01266 2768 aa10.14□□□□□ -0.79
CDK9-205ENST00000498339 VSTM5A8MXK1 200 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 ESPNB1AK53 854 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 ETV2O00321 342 aaPredicted RBP10.13□□□□□ -0.79
CDK9-205ENST00000498339 SLC28A1O00337 649 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 TBX19O60806 448 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 RYKP34925 604 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 SOAT1P35610 550 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 APOBEC1P41238 236 aaKnown RBP10.13□□□□□ -0.79
CDK9-205ENST00000498339 CCT3P49368 545 aaKnown RBP10.13□□□□□ -0.79
CDK9-205ENST00000498339 SLC16A1P53985 500 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 HILS1P60008 231 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 PDE7AQ13946 482 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 ADRM1Q16186 407 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 AWAT1Q58HT5 328 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 EXOSC6Q5RKV6 272 aaKnown RBP10.13□□□□□ -0.79
CDK9-205ENST00000498339 PRR31Q5SQ13 230 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 CLEC6AQ6EIG7 209 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 DEF8Q6ZN54 512 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 SPATA21Q7Z572 469 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 R3HCC1LQ7Z5L2 792 aaKnown RBP10.13□□□□□ -0.79
CDK9-205ENST00000498339 ABHD12BQ7Z5M8 362 aaPredicted RBP10.13□□□□□ -0.79
CDK9-205ENST00000498339 ZNF786Q8N393 782 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 TMEM186Q96B77 213 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 LRRC37BQ96QE4 947 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 OR7D2Q96RA2 312 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 NAA11Q9BSU3 229 aaPredicted RBP10.13□□□□□ -0.79
CDK9-205ENST00000498339 OR11A1Q9GZK7 315 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 LAT2Q9GZY6 243 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 TPK1Q9H3S4 243 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 HDGFL3Q9Y3E1 203 aa10.13□□□□□ -0.79
CDK9-205ENST00000498339 FLVCR1Q9Y5Y0 555 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms