RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 LRRN3E7EW58 273 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 DKK1O94907 266 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 NUDT14O95848 222 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 FBXO45P0C2W1 286 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 CDK4P11802 303 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 PIPP12273 146 aaPredicted RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 TMED10P49755 219 aaKnown RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 CBFBQ13951 182 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 PPP1R32Q7Z5V6 425 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 STX19Q8N4C7 294 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 B4GALNT2Q8NHY0 566 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 RORBQ92753 470 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 TMEM43Q9BTV4 400 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 C12orf10Q9HB07 376 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 MCCC2Q9HCC0 563 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF160Q9HCG1 818 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 MED17Q9NVC6 651 aa14.93□□□□□ -0.02
HLA-A-208ENST00000496081 RPL36Q9Y3U8 105 aaKnown RBP14.93□□□□□ -0.02
HLA-A-208ENST00000496081 C2orf72A6NCS6 295 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 MAN1A2O60476 641 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 HMGN1P05114 100 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 ADRA2AP08913 450 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 DBTP11182 482 aaKnown RBP14.92□□□□□ -0.02
HLA-A-208ENST00000496081 GAS1P54826 345 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 EGR4Q05215 589 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF91Q05481 1191 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 C17orf67Q0P5P2 114 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 COL28A1Q2UY09 1125 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 GPR107Q5VW38 600 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 SLC46A3Q7Z3Q1 461 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 LNX2Q8N448 690 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 SLC15A4Q8N697 577 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 LRRC17Q8N6Y2 441 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 GPR119Q8TDV5 335 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 NMD3Q96D46 503 aaKnown RBP14.92□□□□□ -0.02
HLA-A-208ENST00000496081 GALNT9Q9HCQ5 603 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 MPDZO75970 2070 aa14.92□□□□□ -0.02
HLA-A-208ENST00000496081 CDC40O60508 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
HLA-A-208ENST00000496081 GFRA3O60609 400 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 ITGA10O75578 1167 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 WISP1O95388 367 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 SLC2A10O95528 541 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 IGF2P01344 180 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 ACVR2AP27037 513 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 OTX2P32243 289 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 GRK5P34947 590 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 SSPNQ14714 243 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 NTRK2Q16620 822 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 BICRALQ6AI39 1079 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 OR5M10Q6IEU7 315 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 RTL4Q6ZR62 310 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 CYP4Z2PQ8N1L4 340 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 ESX1Q8N693 406 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 OR10G3Q8NGC4 313 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 ISOC1Q96CN7 298 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 SPACA9Q96E40 222 aaPredicted RBP14.91□□□□□ -0.02
HLA-A-208ENST00000496081 PLEKHA8Q96JA3 519 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 OSGIN1Q9UJX0 560 aa14.91□□□□□ -0.02
HLA-A-208ENST00000496081 HTR3EA5X5Y0 456 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 KDM4EB2RXH2 506 aaPredicted RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 B4DXG7 233 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 MASP2O00187 686 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 OR7A10O76100 309 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 LCKP06239 509 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 GP1BBP13224 206 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 DCKP27707 260 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 SOX3P41225 446 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 RPS15P62841 145 aaKnown RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 IRF3Q14653 427 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 QPRTQ15274 297 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 TBCEQ15813 527 aaPredicted RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF791Q3KP31 576 aaPredicted RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 SYT6Q5T7P8 510 aaPredicted RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 CACTIN-AS1Q8N1I8 211 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 ANKK1Q8NFD2 765 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 IFT27Q9BW83 186 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 CDCA4Q9BXL8 241 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 NAA50Q9GZZ1 169 aaKnown RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 RIF1Q5UIP0 2472 aaKnown RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 SPAARA0A1B0GVQ0 90 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 PRODHO43272 600 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 TNFSF15O95150 251 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 FTH1P19P0C7X4 201 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 PTGDSP41222 190 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 SLC9A3P48764 834 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 ST13P50502 369 aaKnown RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 AADACL4Q5VUY2 407 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 UBE2UQ5VVX9 321 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 NLGN4YQ8NFZ3 816 aaPredicted RBP14.9□□□□□ -0.02
HLA-A-208ENST00000496081 TAS2R16Q9NYV7 291 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 TAS2R10Q9NYW0 307 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 KLRF1Q9NZS2 232 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF337Q9Y3M9 751 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 COMMD3-BMI1R4GMX3 469 aa14.9□□□□□ -0.02
HLA-A-208ENST00000496081 ZNF701M0R085 212 aaPredicted RBP14.89□□□□□ -0.03
HLA-A-208ENST00000496081 FOXD2O60548 495 aaPredicted RBP14.89□□□□□ -0.03
HLA-A-208ENST00000496081 PPP1R3DO95685 299 aa14.89□□□□□ -0.03
HLA-A-208ENST00000496081 CCNA2P20248 432 aa14.89□□□□□ -0.03
HLA-A-208ENST00000496081 F8A1P23610 371 aa14.89□□□□□ -0.03
HLA-A-208ENST00000496081 CXCR1P25024 350 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms