RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 MFSD9Q8NBP5 474 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 NEIL2Q969S2 332 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 FAM122AQ96E09 287 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 SLC38A2Q96QD8 506 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 CCNL2Q96S94 520 aaPredicted RBP4.01□□□□□ -1.77
SSR3-208ENST00000496050 COPS8Q99627 209 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 ZNF184Q99676 751 aaPredicted RBP4.01□□□□□ -1.77
SSR3-208ENST00000496050 CNPY3Q9BT09 278 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 GON7Q9BXV9 100 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 PTGES2Q9H7Z7 377 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 SGK2Q9HBY8 427 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 MCCC2Q9HCC0 563 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 ADAM28Q9UKQ2 775 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 UBQLN1Q9UMX0 589 aaKnown RBP4.01□□□□□ -1.77
SSR3-208ENST00000496050 RRP15Q9Y3B9 282 aaKnown RBP4.01□□□□□ -1.77
SSR3-208ENST00000496050 ASB3Q9Y575 518 aa4.01□□□□□ -1.77
SSR3-208ENST00000496050 IGLV3-10A0A075B6K4 115 aa4□□□□□ -1.77
SSR3-208ENST00000496050 IGHV1OR15-1A0A075B7D0 117 aa4□□□□□ -1.77
SSR3-208ENST00000496050 A0A1B0GUS0 222 aa4□□□□□ -1.77
SSR3-208ENST00000496050 TUBAL3A6NHL2 446 aa4□□□□□ -1.77
SSR3-208ENST00000496050 IDSB3KWA1 339 aa4□□□□□ -1.77
SSR3-208ENST00000496050 H0Y8G0 127 aa4□□□□□ -1.77
SSR3-208ENST00000496050 GOLGA8SH3BPF8 625 aa4□□□□□ -1.77
SSR3-208ENST00000496050 HIP1O00291 1037 aa4□□□□□ -1.77
SSR3-208ENST00000496050 LYPD3O95274 346 aa4□□□□□ -1.77
SSR3-208ENST00000496050 NCK1P16333 377 aa4□□□□□ -1.77
SSR3-208ENST00000496050 LEPP41159 167 aa4□□□□□ -1.77
SSR3-208ENST00000496050 SULT1E1P49888 294 aa4□□□□□ -1.77
SSR3-208ENST00000496050 DIO3P55073 304 aa4□□□□□ -1.77
SSR3-208ENST00000496050 RPS8P62241 208 aaKnown RBP4□□□□□ -1.77
SSR3-208ENST00000496050 RPL23AP62750 156 aaKnown RBP4□□□□□ -1.77
SSR3-208ENST00000496050 DDX39BQ13838 428 aaKnown RBP4□□□□□ -1.77
SSR3-208ENST00000496050 ISXQ2M1V0 245 aa4□□□□□ -1.77
SSR3-208ENST00000496050 C1orf220Q5T0J3 134 aa4□□□□□ -1.77
SSR3-208ENST00000496050 LCE1FQ5T754 118 aa4□□□□□ -1.77
SSR3-208ENST00000496050 NBPF5PQ86XG9 351 aaPredicted RBP4□□□□□ -1.77
SSR3-208ENST00000496050 FBXO16Q8IX29 292 aaPredicted RBP4□□□□□ -1.77
SSR3-208ENST00000496050 SKA3Q8IX90 412 aa4□□□□□ -1.77
SSR3-208ENST00000496050 OR56B4Q8NH76 319 aa4□□□□□ -1.77
SSR3-208ENST00000496050 ST8SIA1Q92185 356 aa4□□□□□ -1.77
SSR3-208ENST00000496050 B3GALT6Q96L58 329 aa4□□□□□ -1.77
SSR3-208ENST00000496050 CLCC1Q96S66 551 aa4□□□□□ -1.77
SSR3-208ENST00000496050 GAL3ST1Q99999 423 aa4□□□□□ -1.77
SSR3-208ENST00000496050 TCHPQ9BT92 498 aa4□□□□□ -1.77
SSR3-208ENST00000496050 RNF126Q9BV68 326 aa4□□□□□ -1.77
SSR3-208ENST00000496050 NHEJ1Q9H9Q4 299 aaPredicted RBP4□□□□□ -1.77
SSR3-208ENST00000496050 TNFRSF19Q9NS68 423 aa4□□□□□ -1.77
SSR3-208ENST00000496050 PIGLQ9Y2B2 252 aa4□□□□□ -1.77
SSR3-208ENST00000496050 SMAD5-AS1Q9Y6J3 95 aa4□□□□□ -1.77
SSR3-208ENST00000496050 FRMPD3Q5JV73 1810 aa4□□□□□ -1.77
SSR3-208ENST00000496050 KLF18A0A0U1RQI7 1052 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 TRIM64CA6NLI5 447 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 SNTNA6NMZ2 147 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 NBR2O15453 112 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 RGS16O15492 202 aaPredicted RBP3.99□□□□□ -1.77
SSR3-208ENST00000496050 MED7O43513 233 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 PRKAB2O43741 272 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 TIMM8AO60220 97 aaPredicted RBP3.99□□□□□ -1.77
SSR3-208ENST00000496050 ATP5LO75964 103 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 IGHV3-23P01764 117 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 MX1P20591 662 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 CALCRP30988 508 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 CCR1P32246 355 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 RFC4P35249 363 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 EPS15P42566 896 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 BTDP43251 543 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 PKNOX1P55347 436 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 ATP5IP56385 69 aaPredicted RBP3.99□□□□□ -1.77
SSR3-208ENST00000496050 LRRC74AQ0VAA2 488 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 KLRB1Q12918 225 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 KYAT1Q16773 422 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 IMMTQ16891 758 aaKnown RBP3.99□□□□□ -1.77
SSR3-208ENST00000496050 KLHL38Q2WGJ6 581 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 DMRTC1Q5HYR2 192 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 PDZK1Q5T2W1 519 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 HSD17B13Q7Z5P4 300 aaPredicted RBP3.99□□□□□ -1.77
SSR3-208ENST00000496050 ZNF100Q8IYN0 542 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 CATSPER1Q8NEC5 780 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 OR10H4Q8NGA5 316 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 C10orf35Q96D05 121 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 PGLYRP4Q96LB8 373 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 SMIM14Q96QK8 99 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 MAPKAP1Q9BPZ7 522 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 NICN1Q9BSH3 213 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 SLITRK2Q9H156 845 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 REEP4Q9H6H4 257 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 VCPKMTQ9H867 229 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 BFARQ9NZS9 450 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 RABL2BQ9UNT1 228 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 NPTNQ9Y639 398 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 PLEKHH1Q9ULM0 1364 aa3.99□□□□□ -1.77
SSR3-208ENST00000496050 HELTA6NFD8 242 aa3.98□□□□□ -1.77
SSR3-208ENST00000496050 VSTM2BA6NLU5 285 aa3.98□□□□□ -1.77
SSR3-208ENST00000496050 ERI2A8K979 691 aaKnown RBP3.98□□□□□ -1.77
SSR3-208ENST00000496050 UBXN8O00124 270 aa3.98□□□□□ -1.77
SSR3-208ENST00000496050 DIRAS1O95057 198 aa3.98□□□□□ -1.77
SSR3-208ENST00000496050 HSPB1P04792 205 aaKnown RBP3.98□□□□□ -1.77
SSR3-208ENST00000496050 RPS2P15880 293 aaKnown RBP3.98□□□□□ -1.77
SSR3-208ENST00000496050 DUSP3P51452 185 aaPredicted RBP3.98□□□□□ -1.77
SSR3-208ENST00000496050 CDH4P55283 916 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms