RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 FBXL2Q9UKC9 423 aa13.61□□□□□ -0.23
GAPDH-210ENST00000496049 OAZ3Q9UMX2 235 aa13.61□□□□□ -0.23
GAPDH-210ENST00000496049 VDAC3Q9Y277 283 aa13.61□□□□□ -0.23
GAPDH-210ENST00000496049 NTNG1Q9Y2I2 539 aa13.61□□□□□ -0.23
GAPDH-210ENST00000496049 SPIN1Q9Y657 262 aaPredicted RBP13.61□□□□□ -0.23
GAPDH-210ENST00000496049 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 ARRDC5A6NEK1 342 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 LRRC3CA6NJW4 275 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 C17orf51A8MQB3 221 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 SEMA7AO75326 666 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 HK1P19367 917 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 CXCR1P25024 350 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 DPP4P27487 766 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 GDF1P27539 372 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 SRD5A2P31213 254 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 GCKP35557 465 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 MERTKQ12866 999 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 FOXD4Q12950 439 aaPredicted RBP13.6□□□□□ -0.23
GAPDH-210ENST00000496049 ZNF169Q14929 603 aaPredicted RBP13.6□□□□□ -0.23
GAPDH-210ENST00000496049 EXOC3L2Q2M3D2 409 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 PLPPR5Q32ZL2 321 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 SLC22A16Q86VW1 577 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 C9orf43Q8TAL5 461 aaPredicted RBP13.6□□□□□ -0.23
GAPDH-210ENST00000496049 ACOT11Q8WXI4 607 aaPredicted RBP13.6□□□□□ -0.23
GAPDH-210ENST00000496049 C3orf49Q96BT1 292 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 NTNG2Q96CW9 530 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 GNRHR2Q96P88 292 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 PRR14Q9BWN1 585 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 HES7Q9BYE0 225 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 SERINC1Q9NRX5 453 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 DEPPQ9NTK1 212 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 MED13LQ71F56 2210 aa13.6□□□□□ -0.23
GAPDH-210ENST00000496049 PDZD2O15018 2839 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 HIVEP3Q5T1R4 2406 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ZNF17P17021 662 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 PRKCAP17252 672 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ELK4P28324 431 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 GRNP28799 593 aaKnown RBP13.59□□□□□ -0.23
GAPDH-210ENST00000496049 TACR3P29371 465 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 APOBEC1P41238 236 aaKnown RBP13.59□□□□□ -0.23
GAPDH-210ENST00000496049 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 MAP2K6P52564 334 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 FOXF1Q12946 379 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ESPL1Q14674 2120 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 INAQ16352 499 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 MICAQ29983 383 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 RAET1LQ5VY80 246 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 TTC33Q6PID6 262 aaPredicted RBP13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ATG4DQ86TL0 474 aaPredicted RBP13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ATCAYQ86WG3 371 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 OR10G2Q8NGC3 310 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 OR4C15Q8NGM1 316 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 OR14L1PQ8NHC6 308 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 PIGXQ8TBF5 258 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 GIPC3Q8TF64 312 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 MIB2Q96AX9 1013 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ABHD17AQ96GS6 310 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 CIB1Q99828 191 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 PIGQQ9BRB3 760 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 TTTY12Q9BZ98 90 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 SLC19A3Q9BZV2 496 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ZNF703Q9H7S9 590 aaPredicted RBP13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ZNF556Q9HAH1 456 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 NTN4Q9HB63 628 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 VNN3Q9NY84 501 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 ORC6Q9Y5N6 252 aa13.59□□□□□ -0.23
GAPDH-210ENST00000496049 HIVEP1P15822 2718 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 TRBV4-1A0A0J9YWV2 114 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 C7orf72A4D263 438 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 OR10H3O60404 316 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 PEX2P28328 305 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 ADH6P28332 368 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 LIMS1P48059 325 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 HMGA2P52926 109 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 UGT2B15P54855 530 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 DLX5P56178 289 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 SELENBP1Q13228 472 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 INPP5JQ15735 1006 aaPredicted RBP13.58□□□□□ -0.24
GAPDH-210ENST00000496049 TOMM34Q15785 309 aaPredicted RBP13.58□□□□□ -0.24
GAPDH-210ENST00000496049 KRTAP21-3Q3LHN1 58 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 GLYR1Q49A26 553 aaPredicted RBP13.58□□□□□ -0.24
GAPDH-210ENST00000496049 SLC25A53Q5H9E4 307 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 PODNL1Q6PEZ8 512 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 POMZP3Q6PJE2 187 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 C5orf46Q6UWT4 87 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 ARSKQ6UWY0 536 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 ASB18Q6ZVZ8 466 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.58□□□□□ -0.24
GAPDH-210ENST00000496049 STK32CQ86UX6 486 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 TSPYL5Q86VY4 417 aaPredicted RBP13.58□□□□□ -0.24
GAPDH-210ENST00000496049 CDK20Q8IZL9 346 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 RNF113BQ8IZP6 322 aaKnown RBP13.58□□□□□ -0.24
GAPDH-210ENST00000496049 ATG16L2Q8NAA4 619 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 ZFP62Q8NB50 900 aaPredicted RBP13.58□□□□□ -0.24
GAPDH-210ENST00000496049 SLC7A13Q8TCU3 470 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 SSC4DQ8WTU2 575 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 TMEM239Q8WW34 195 aa13.58□□□□□ -0.24
GAPDH-210ENST00000496049 DNAJC9Q8WXX5 260 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms