RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ROPN1LQ96C74 230 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 GDF2Q9UK05 429 aaPredicted RBP20.49■□□□□ 0.87
COL27A1-208ENST00000494780 COL6A5A8TX70 2615 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 CR1P17927 2039 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 CD5LO43866 347 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 BCAS1O75363 584 aaPredicted RBP20.48■□□□□ 0.87
COL27A1-208ENST00000494780 RAD51DO75771 328 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 CPSF4O95639 269 aaKnown RBP20.48■□□□□ 0.87
COL27A1-208ENST00000494780 SERPINE1P05121 402 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 MYZAPP0CAP1 466 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 SLC16A1P53985 500 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 VSNL1P62760 191 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 FRRS1Q6ZNA5 592 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 ANKRD46Q86W74 232 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 NEURL3Q96EH8 262 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 PKNOX2Q96KN3 472 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 PPP1R36Q96LQ0 422 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 EXOSC3Q9NQT5 275 aaKnown RBP20.48■□□□□ 0.87
COL27A1-208ENST00000494780 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.48■□□□□ 0.87
COL27A1-208ENST00000494780 B3GALT5Q9Y2C3 310 aa20.48■□□□□ 0.87
COL27A1-208ENST00000494780 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.48■□□□□ 0.87
COL27A1-208ENST00000494780 ABCA1O95477 2261 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 CIB4A0PJX0 185 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 IGHV3-9P01782 118 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 PTAFRP25105 342 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 RYKP34925 604 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 KHKP50053 298 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 ABCE1P61221 599 aaKnown RBP20.47■□□□□ 0.87
COL27A1-208ENST00000494780 PHC1P78364 1004 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 FUT5Q11128 374 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 EMBQ6PCB8 327 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 KLHL17Q6TDP4 642 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 TRIM44Q96DX7 344 aaPredicted RBP20.47■□□□□ 0.87
COL27A1-208ENST00000494780 ARL5BQ96KC2 179 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 TMEM109Q9BVC6 243 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 ASB6Q9NWX5 421 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 TAS2R16Q9NYV7 291 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 MALT1Q9UDY8 824 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 RAP2CQ9Y3L5 183 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 SLC25A15Q9Y619 301 aa20.47■□□□□ 0.87
COL27A1-208ENST00000494780 FBN3Q75N90 2809 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 CCT8L1PA6NM43 557 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 MRPL33O75394 65 aaKnown RBP20.46■□□□□ 0.87
COL27A1-208ENST00000494780 SNUPNO95149 360 aaKnown RBP20.46■□□□□ 0.87
COL27A1-208ENST00000494780 HTR3AP46098 478 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 KCNJ10P78508 379 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 HPCAP84074 193 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 CASP8Q14790 479 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 CHI3L2Q15782 390 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 DPY19L1Q2PZI1 675 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 ADGRG3Q86Y34 549 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 LRRC34Q8IZ02 419 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
COL27A1-208ENST00000494780 ARFGAP2Q8N6H7 521 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 AENQ8WTP8 325 aaKnown RBP20.46■□□□□ 0.87
COL27A1-208ENST00000494780 ZG16BQ96DA0 208 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 ADAD1Q96M93 576 aaKnown RBP20.46■□□□□ 0.87
COL27A1-208ENST00000494780 RHNO1Q9BSD3 238 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 TRAPPC4Q9Y296 219 aa20.46■□□□□ 0.87
COL27A1-208ENST00000494780 WDR91A4D1P6 747 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 BIRC5O15392 142 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 SSX4O60224 188 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 DHRS4L1P0CG22 281 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 TTKP33981 857 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 CHI3L1P36222 383 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-208ENST00000494780 MAGEA8P43361 318 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 CLNS1AP54105 237 aaKnown RBP20.45■□□□□ 0.86
COL27A1-208ENST00000494780 GPAT3Q53EU6 434 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 OR7E24Q6IFN5 339 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 KIRREL3Q8IZU9 778 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 OR52N5Q8NH56 324 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 MUS81Q96NY9 551 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 DHRS9Q9BPW9 319 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 SLC35A5Q9BS91 424 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 OR11A1Q9GZK7 315 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 YAE1D1Q9NRH1 226 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 CBLN4Q9NTU7 201 aa20.45■□□□□ 0.86
COL27A1-208ENST00000494780 MARCOQ9UEW3 520 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-208ENST00000494780 E7EQL1 145 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 PTNP21246 168 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 CD40P25942 277 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 NTF4P34130 210 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 IDH2P48735 452 aaKnown RBP20.44■□□□□ 0.86
COL27A1-208ENST00000494780 RPL14P50914 215 aaKnown RBP20.44■□□□□ 0.86
COL27A1-208ENST00000494780 ZNF83P51522 516 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 OR2B6P58173 313 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 H3F3AP84243 136 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 PLAURQ03405 335 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 CHRNEQ04844 493 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 GABRA6Q16445 453 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 SPANXN4Q5MJ08 99 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 C11orf71Q6IPW1 123 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 SLC22A25Q6T423 547 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 HIPK1Q86Z02 1210 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 CCDC103Q8IW40 242 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 CMIPQ8IY22 773 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 DNAJA3Q96EY1 480 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 CACNG6Q9BXT2 260 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 TMEM181Q9P2C4 612 aa20.44■□□□□ 0.86
COL27A1-208ENST00000494780 POU2F3Q9UKI9 436 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms