RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ITGADQ13349 1161 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 DPY19L1Q2PZI1 675 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 GTDC1Q4AE62 458 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 GPAT3Q53EU6 434 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 ANXA8L1Q5VT79 327 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 AP1ARQ63HQ0 302 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 GTF2IRD2BQ6EKJ0 949 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 TMPPEQ6ZT21 453 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 BHLHA15Q7RTS1 189 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-208ENST00000494728 GTF2IRD2Q86UP8 949 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 SLC43A2Q8N370 569 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 MGARPQ8TDB4 240 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 TMEM171Q8WVE6 324 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 PAIP2Q9BPZ3 127 aaKnown RBP10.29□□□□□ -0.76
VTI1A-208ENST00000494728 TACO1Q9BSH4 297 aaKnown RBP10.29□□□□□ -0.76
VTI1A-208ENST00000494728 POTEKPQ9BYX7 375 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 CHRNA9Q9UGM1 479 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 BTNL2Q9UIR0 455 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 LAMP3Q9UQV4 416 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 RNF115Q9Y4L5 304 aa10.29□□□□□ -0.76
VTI1A-208ENST00000494728 IGKV3D-15A0A087WSY6 115 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 ZC3H12DA2A288 527 aaKnown RBP10.28□□□□□ -0.76
VTI1A-208ENST00000494728 CCDC154A6NI56 674 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF724A8MTY0 619 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 SULT2B1O00204 365 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 NDUFS7O75251 213 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 PGRP06401 933 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 CCNA2P20248 432 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 CHI3L1P36222 383 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-208ENST00000494728 CDKN1AP38936 164 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 CLNS1AP54105 237 aaKnown RBP10.28□□□□□ -0.76
VTI1A-208ENST00000494728 ATP5J2P56134 94 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 P2RY6Q15077 328 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 STK11Q15831 433 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 PGGHGQ32M88 737 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 SLC9B1Q4ZJI4 515 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 ATAD3BQ5T9A4 648 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 ADGRG3Q86Y34 549 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 CCDC103Q8IW40 242 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 LRRC34Q8IZ02 419 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF433Q8N7K0 673 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-208ENST00000494728 MAPK1IP1LQ8NDC0 245 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 OR9I1Q8NGQ6 314 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF563Q8TA94 476 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 PIWIL2Q8TC59 973 aaKnown RBP10.28□□□□□ -0.76
VTI1A-208ENST00000494728 VPS33AQ96AX1 596 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 TRIM2Q9C040 744 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 FANCFQ9NPI8 374 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 EXOSC3Q9NQT5 275 aaKnown RBP10.28□□□□□ -0.76
VTI1A-208ENST00000494728 POLE3Q9NRF9 147 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 PCDHGB4Q9UN71 923 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 SLC35A3Q9Y2D2 325 aa10.28□□□□□ -0.76
VTI1A-208ENST00000494728 RTTNQ86VV8 2226 aa10.27□□□□□ -0.76
VTI1A-208ENST00000494728 TMEM72A0PK05 275 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 AGAP5A6NIR3 686 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 SHISA9B4DS77 424 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 OVOL3O00110 214 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 RAD51DO75771 328 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 AGR2O95994 175 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 CD3EP07766 207 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 THBS1P07996 1170 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 TFPIP10646 304 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 KITP10721 976 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 IMPDH2P12268 514 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 PTNP21246 168 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 PCSK6P29122 969 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 APOBEC1P41238 236 aaKnown RBP10.27□□□□□ -0.77
VTI1A-208ENST00000494728 IDH2P48735 452 aaKnown RBP10.27□□□□□ -0.77
VTI1A-208ENST00000494728 KCNJ10P78508 379 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF672Q499Z4 452 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-208ENST00000494728 MRPL2Q5T653 305 aaKnown RBP10.27□□□□□ -0.77
VTI1A-208ENST00000494728 GRINAQ7Z429 371 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 GALNT5Q7Z7M9 940 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 PRIMA1Q86XR5 153 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 SLC25A43Q8WUT9 341 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-208ENST00000494728 TMEM234Q8WY98 164 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 HSD17B8Q92506 261 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 FBXW5Q969U6 566 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 AURKBQ96GD4 344 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-208ENST00000494728 OR52B2Q96RD2 323 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 OR52E6Q96RD3 313 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 PANX1Q96RD7 426 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 HDHD5Q9BXW7 423 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 CXorf56Q9H5V9 222 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 OSGIN1Q9UJX0 560 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 CHST2Q9Y4C5 530 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 DSPPQ9NZW4 1301 aa10.27□□□□□ -0.77
VTI1A-208ENST00000494728 TMED7-TICAM2A0A0A6YYA0 188 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 A0A1W2PR80 420 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 INAFM1C9JVW0 142 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 HDAC3O15379 428 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 SNUPNO95149 360 aaKnown RBP10.26□□□□□ -0.77
VTI1A-208ENST00000494728 PGM3O95394 542 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 PMS2P2O95744 297 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 CD8AP01732 235 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 IGHV4-39P01824 125 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 ITGA5P08648 1049 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 ETFAP13804 333 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 SLC16A1P53985 500 aa10.26□□□□□ -0.77
VTI1A-208ENST00000494728 CSNK2A1P68400 391 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms