RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 OR52N1Q8NH53 320 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 OR51A7Q8NH64 312 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 MCFD2Q8NI22 146 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 CEP76Q8TAP6 659 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 HSPBAP1Q96EW2 488 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SH3YL1Q96HL8 342 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 GFM1Q96RP9 751 aaKnown RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 GPX7Q96SL4 187 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 WDR77Q9BQA1 342 aaPredicted RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SLC19A3Q9BZV2 496 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SEMA4CQ9C0C4 833 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 WDR12Q9GZL7 423 aaKnown RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 NXF2Q9GZY0 626 aaKnown RBP9.74□□□□□ -0.85
CLCN6-208ENST00000494028 LAT2Q9GZY6 243 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 CHRNA9Q9UGM1 479 aa9.74□□□□□ -0.85
CLCN6-208ENST00000494028 SEC16AO15027 2179 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ELOA3DA6NLF2 546 aaPredicted RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 CLDN25C9JDP6 229 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 WWP2O00308 870 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 LALBAP00709 142 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 PNMTP11086 282 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 FGF5P12034 268 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 HPGDP15428 266 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF3P17036 446 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ABCD3P28288 659 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 SLC6A8P48029 635 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 COPZ1P61923 177 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 RPS25P62851 125 aaKnown RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 PSPHP78330 225 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ELOA3BQ3SY89 546 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF362Q5T0B9 420 aaPredicted RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 FCRLBQ6BAA4 426 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 PAPD4Q6PIY7 484 aaKnown RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 PRR23CQ6ZRP0 262 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 MEPCEQ7L2J0 689 aaKnown RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 OVCH1Q7RTY7 1134 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 PPP1R3BQ86XI6 285 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 CROCCP3Q8IVE0 287 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 KLHL36Q8N4N3 616 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 BMPERQ8N8U9 685 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 SLC37A3Q8NCC5 494 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 APCDD1LQ8NCL9 501 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 PSD4Q8NDX1 1056 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ELOA3Q8NG57 546 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 OR51G2Q8NGK0 314 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 OR9Q1Q8NGQ5 310 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 LRFN5Q96NI6 719 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 TNFRSF13CQ96RJ3 184 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 SMOC1Q9H4F8 434 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 C12orf10Q9HB07 376 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 OCIAD1Q9NX40 245 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ERVK13-1Q9NX77 482 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 PPIEQ9UNP9 301 aaKnown RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 YARS2Q9Y2Z4 477 aaKnown RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 SF3B6Q9Y3B4 125 aaKnown RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF337Q9Y3M9 751 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 SPIN1Q9Y657 262 aaPredicted RBP9.73□□□□□ -0.85
CLCN6-208ENST00000494028 A3GALT2U3KPV4 340 aa9.73□□□□□ -0.85
CLCN6-208ENST00000494028 C12orf71A8MTZ7 269 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 PRR23D1E9PI22 279 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF670-ZNF695F2Z2N8 137 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 GTPBP1O00178 669 aaKnown RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 SCO2O43819 266 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 EIF4E2O60573 245 aaKnown RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 CPNE3O75131 537 aaKnown RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 HEXBP07686 556 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 CYC1P08574 325 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 PRR23D2P0DMB1 279 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 CLUP10909 449 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 EVI2BP34910 448 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 CRYBB2P43320 205 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 PNLIPRP2P54317 469 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 RNF4P78317 190 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 DCDP81605 110 aaKnown RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 DBPQ10586 325 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 ITGADQ13349 1161 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 TMED1Q13445 227 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 TRA2AQ13595 282 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 TPBGQ13641 420 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF74Q16587 644 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF404Q494X3 552 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 LIPKQ5VXJ0 399 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 VASNQ6EMK4 673 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 LCN10Q6JVE6 187 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 FAM198BQ6UWH4 519 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 B3GLCTQ6Y288 498 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 GDPGP1Q6ZNW5 385 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 BTLAQ7Z6A9 289 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 LRRC17Q8N6Y2 441 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 CYB561A3Q8NBI2 242 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 SDR9C7Q8NEX9 313 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 NUBPLQ8TB37 319 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 FNDC8Q8TC99 324 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 RNF138Q8WVD3 245 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 S100ZQ8WXG8 99 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 UFD1Q92890 307 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 OTULINQ96BN8 352 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 CDADC1Q9BWV3 514 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms