RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SLC7A7Q9UM01 511 aa17.9■□□□□ 0.46
SNAPC3-206ENST00000490969 UNC119BA6NIH7 251 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 PLATP00750 562 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 HIST1H2ABP04908 130 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 SBK2P0C263 348 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 MAT2AP31153 395 aaKnown RBP17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 GK2Q14410 553 aaPredicted RBP17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 ZNF750Q32MQ0 723 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 HIST3H2AQ7L7L0 130 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 THEM6Q8WUY1 208 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 HIST1H2ACQ93077 130 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 DPH1Q9BZG8 443 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 ARL6Q9H0F7 186 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 IGFLR1Q9H665 355 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 GPN1Q9HCN4 374 aaPredicted RBP17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 EQTNQ9NQ60 294 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 KLF15Q9UIH9 416 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 ST6GALNAC2Q9UJ37 374 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 KIAA1549LQ6ZVL6 1849 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 A0A0A6YYD5 115 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 OTOL1A6NHN0 477 aaPredicted RBP17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 D6RAR5 112 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 GABARAPH6UMI1 98 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 H7BY64 318 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 MAN2B1O00754 1011 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 ZNF749O43361 778 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 SELENOFO60613 162 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 SERPINA3P01011 423 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 PRG2P13727 222 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 NT5EP21589 574 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 PRKAR1BP31321 381 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 OR4C11Q6IEV9 310 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 OR56A1Q8NGH5 318 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 MRPS24Q96EL2 167 aaKnown RBP17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 PRAP1Q96NZ9 151 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 ADGRL4Q9HBW9 690 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 KRCC1Q9NPI7 259 aaPredicted RBP17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 KLHL9Q9P2J3 617 aa17.89■□□□□ 0.45
SNAPC3-206ENST00000490969 CHURC1-FNTBB4DL54 471 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 KHDRBS3O75525 346 aaKnown RBP17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 ARL6IP5O75915 188 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 KRT33AO76009 404 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 SSR2P43308 183 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 TRA2BP62995 288 aaKnown RBP17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 REEP5Q00765 189 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 LINC00303Q3SY05 128 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 ADIPOR2Q86V24 386 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 C12orf40Q86WS4 652 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 CCDC116Q8IYX3 515 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 LILRB1Q8NHL6 650 aaPredicted RBP17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 KLK11Q9UBX7 282 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 KLF2Q9Y5W3 355 aaPredicted RBP17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 HMSDA8MTL9 139 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 SDC3O75056 442 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 TEAD1P28347 426 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 FLI1Q01543 452 aaPredicted RBP17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 DUSP2Q05923 314 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 EIF2B5Q13144 721 aaKnown RBP17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 GSG1LQ6UXU4 331 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 ZNF547Q8IVP9 402 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 LNX2Q8N448 690 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 CYB5D2Q8WUJ1 264 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 SMPDL3BQ92485 455 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 CMTM3Q96MX0 182 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 DERL3Q96Q80 235 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 SLC38A3Q99624 504 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 DPEP2Q9H4A9 486 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 SAV1Q9H4B6 383 aaPredicted RBP17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 WASH6PQ9NQA3 447 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 HPF1Q9NWY4 346 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 PCDHGA5Q9Y5G8 931 aa17.88■□□□□ 0.45
SNAPC3-206ENST00000490969 TNRC18O15417 2968 aaPredicted RBP17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 BRWD1Q9NSI6 2320 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 TSPAN11A1L157 253 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 SNRPGP15A8MWD9 76 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 OR1F1O43749 312 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 POP7O75817 140 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 CTSLP07711 333 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 IL9P15248 144 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 PSMB5P28074 263 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 FAM46CQ5VWP2 391 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 SSX6Q7RTT6 188 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 ATOH1Q92858 354 aaPredicted RBP17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 CALML5Q9NZT1 146 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 MED11Q9P086 117 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 GMEB2Q9UKD1 530 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 FAM86C2PA6NEL3 165 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 LINC01565O15544 149 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 KDM4BO94953 1096 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 ZIC2O95409 532 aaPredicted RBP17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 IL5P05113 134 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 BMP7P18075 431 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 DDX6P26196 483 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 NOS3P29474 1203 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 AGERQ15109 404 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 OLFML2AQ68BL7 652 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 FAAP20Q6NZ36 180 aa17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 FAM199XQ6PEV8 388 aaPredicted RBP17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 ZC3H14Q6PJT7 736 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-206ENST00000490969 ZNF793Q6ZN11 406 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms