RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GPATCH2Q9NW75 528 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SH3BP4Q9P0V3 963 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 TMED5Q9Y3A6 229 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 TRAF6Q9Y4K3 522 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 NUP214P35658 2090 aaPredicted RBP7.16□□□□□ -1.26
USP39-216ENST00000490193 PKD1L1Q8TDX9 2849 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 EXOC1LA0A1B0GW35 172 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 A0A1W2PR80 420 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 SERINC4A6NH21 518 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 ATP6V1G2-DDX39BF2Z307 99 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 G3V2L1 256 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 AKAP10O43572 662 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 MRPL33O75394 65 aaKnown RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 TACSTD2P09758 323 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 NEFHP12036 1026 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 DDX5P17844 614 aaKnown RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 FKBP2P26885 142 aaKnown RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 COMPP49747 757 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 CLK1P49759 484 aaKnown RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 SESN3P58005 492 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 DNAJB13P59910 316 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 SNRPD2P62316 118 aaKnown RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 H3F3AP84243 136 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 EFNB3Q15768 340 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 ZNF141Q15928 474 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 RFTN2Q52LD8 501 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 ZYG11AQ6WRX3 759 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 R3HCC1LQ7Z5L2 792 aaKnown RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 TMCO5AQ8N6Q1 288 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 FAM71CQ8NEG0 241 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 SEMA6DQ8NFY4 1073 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 OR56A1Q8NGH5 318 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 OR2T11Q8NH01 316 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 ADAMTS15Q8TE58 950 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 OIT3Q8WWZ8 545 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 TMEM234Q8WY98 164 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 ZMYND19Q96E35 227 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 FBXO17Q96EF6 278 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 ZHX1-C8orf76Q96EF9 292 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 CHMP6Q96FZ7 201 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 SDF2Q99470 211 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 FMO2Q99518 471 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 THUMPD3Q9BV44 507 aaKnown RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 BHLHE41Q9C0J9 482 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 ACER3Q9NUN7 267 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 ATP6V1HQ9UI12 483 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 FBXO9Q9UK97 447 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 EMCNQ9ULC0 261 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 FAF1Q9UNN5 650 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 HDGFL3Q9Y3E1 203 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 SPIN1Q9Y657 262 aaPredicted RBP7.15□□□□□ -1.26
USP39-216ENST00000490193 KCNE3Q9Y6H6 103 aa7.15□□□□□ -1.26
USP39-216ENST00000490193 B9A039 149 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 ANKRD28O15084 1053 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 LSM1O15116 133 aaKnown RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 SCAMP2O15127 329 aaKnown RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 CRCPO75575 148 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 STAMBPO95630 424 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 ABHD2P08910 425 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 MYL2P10916 166 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 PGCP20142 388 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 PAX7P23759 505 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 MPGP29372 298 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 ECHS1P30084 290 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 RPL3P39023 403 aaKnown RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 APOBEC1P41238 236 aaKnown RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 CCT3P49368 545 aaKnown RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 PPOXP50336 477 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 RNF144AP50876 292 aaPredicted RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 CCR4P51679 360 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 CHN2P52757 468 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 PRPS1P60891 318 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 TGFBR3Q03167 851 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 MERTKQ12866 999 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 IQCCQ4KMZ1 466 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 PDZK1Q5T2W1 519 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 AP1ARQ63HQ0 302 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 CLEC6AQ6EIG7 209 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 UGT2A3Q6UWM9 527 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 NATD1Q8N6N6 113 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 ZNF614Q8N883 585 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 OR52E4Q8NGH9 312 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 CLHC1Q8NHS4 586 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 SGMS2Q8NHU3 365 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 RFWD2Q8NHY2 731 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 SFXN5Q8TD22 340 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 MZB1Q8WU39 189 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 OR5P2Q8WZ92 322 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 C3orf49Q96BT1 292 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 MOAP1Q96BY2 351 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 ARL5BQ96KC2 179 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 OR7D2Q96RA2 312 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 KATNB1Q9BVA0 655 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 CCDC106Q9BWC9 280 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 C1QTNF6Q9BXI9 259 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 C12orf65Q9H3J6 166 aaKnown RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 PLK3Q9H4B4 646 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 OBP2BQ9NPH6 170 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 SLC7A10Q9NS82 523 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms