RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TIMM23BQ5SRD1 257 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 AP1ARQ63HQ0 302 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 TYW3Q6IPR3 259 aaKnown RBP10.36□□□□□ -0.75
ACTN4-206ENST00000489451 BHLHB9Q6PI77 547 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 TMPPEQ6ZT21 453 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 LRRC34Q8IZ02 419 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 GOLGA6L1Q8N7Z2 621 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 MIPOL1Q8TD10 442 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 MGARPQ8TDB4 240 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 ST8SIA1Q92185 356 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 MOAP1Q96BY2 351 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 PPP1R36Q96LQ0 422 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 CCDC106Q9BWC9 280 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 GRIP2Q9C0E4 1043 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 OR51I1Q9H343 314 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 TMBIM4Q9HC24 238 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 ACER3Q9NUN7 267 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 THAP1Q9NVV9 213 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 ASIC5Q9NY37 505 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 B3GALT5Q9Y2C3 310 aa10.36□□□□□ -0.75
ACTN4-206ENST00000489451 IGHV4-30-2A0A087WSY4 118 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 OR5H1A6NKK0 313 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 TRPC5OSA6NMA1 111 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 SLCO1B7G3V0H7 640 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 RNASET2O00584 256 aaKnown RBP10.35□□□□□ -0.75
ACTN4-206ENST00000489451 ABCD4O14678 606 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 CFLARO15519 480 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 CD5LO43866 347 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 GPRIN2O60269 458 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 STX11O75558 287 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 CYP7B1O75881 506 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 IDUAP35475 653 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 CDH11P55287 796 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 RUNX1T1Q06455 604 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 BST1Q10588 318 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 MERTKQ12866 999 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 PGS1Q32NB8 556 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 FRRS1Q6ZNA5 592 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 ANKRD46Q86W74 232 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 VPS37AQ8NEZ2 397 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 RAB8BQ92930 207 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 GTPBP3Q969Y2 492 aaKnown RBP10.35□□□□□ -0.75
ACTN4-206ENST00000489451 TRMT61AQ96FX7 289 aaKnown RBP10.35□□□□□ -0.75
ACTN4-206ENST00000489451 SLC35G5Q96KT7 338 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 NUF2Q9BZD4 464 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 OR11A1Q9GZK7 315 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 SAP130Q9H0E3 1048 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 AKTIPQ9H8T0 292 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 NGBQ9NPG2 151 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 CTPS2Q9NRF8 586 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 CISD1Q9NZ45 108 aaKnown RBP10.35□□□□□ -0.75
ACTN4-206ENST00000489451 HAO1Q9UJM8 370 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 PCDHGB4Q9UN71 923 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 SLC25A15Q9Y619 301 aa10.35□□□□□ -0.75
ACTN4-206ENST00000489451 SVEP1Q4LDE5 3571 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 A0A1W2PR80 420 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 PDLIM1O00151 329 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 RAD51DO75771 328 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 AK1P00568 194 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 CSTAP01040 98 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 ITGA5P08648 1049 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 OR12D1P0DN82 309 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 LBPP18428 481 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 GGT1P19440 569 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
ACTN4-206ENST00000489451 H3F3AP84243 136 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 SLC25A3Q00325 362 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 PDK3Q15120 406 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 FBXW9Q5XUX1 488 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 SAXO2Q658L1 398 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 TNFAIP8L2Q6P589 184 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-206ENST00000489451 GALNT5Q7Z7M9 940 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 MTDHQ86UE4 582 aaKnown RBP10.34□□□□□ -0.75
ACTN4-206ENST00000489451 ADGRG3Q86Y34 549 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 CCDC103Q8IW40 242 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 OR10H5Q8NGA6 315 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 OR8J2Q8NGG1 315 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 OR52N5Q8NH56 324 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 HTRA1Q92743 480 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 TLCD1Q96CP7 247 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 TEX37Q96LM6 180 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 SORT1Q99523 831 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
ACTN4-206ENST00000489451 DPY30Q9C005 99 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 MANSC1Q9H8J5 431 aa10.34□□□□□ -0.75
ACTN4-206ENST00000489451 SULT2B1O00204 365 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 AP3D1O14617 1153 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 HDAC3O15379 428 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 GUSBP08236 651 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 PGCP20142 388 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 SLC16A1P53985 500 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 AGBL2Q5U5Z8 902 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 ANXA8L1Q5VT79 327 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 HDXQ7Z353 690 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 HIPK1Q86Z02 1210 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 ZNF100Q8IYN0 542 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 WDR31Q8NA23 367 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 OR52E4Q8NGH9 312 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 OR4A15Q8NGL6 344 aa10.33□□□□□ -0.76
ACTN4-206ENST00000489451 CNOT9Q92600 299 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms