RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 ZHX1-C8orf76Q96EF9 292 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 ADAD1Q96M93 576 aaKnown RBP10.91□□□□□ -0.66
CPSF3-204ENST00000489403 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 EXD2Q9NVH0 621 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 TAS2R16Q9NYV7 291 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
CPSF3-204ENST00000489403 MALT1Q9UDY8 824 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 LGALS13Q9UHV8 139 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 MGAT4BQ9UQ53 548 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 SLC35A3Q9Y2D2 325 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 WDR45Q9Y484 360 aa10.91□□□□□ -0.66
CPSF3-204ENST00000489403 SPIN1Q9Y657 262 aaPredicted RBP10.91□□□□□ -0.66
CPSF3-204ENST00000489403 YLPM1P49750 1951 aaKnown RBP10.9□□□□□ -0.66
CPSF3-204ENST00000489403 CIB4A0PJX0 185 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 FAM234BA2RU67 622 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 CCT8L1PA6NM43 557 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 CLDN24A6NM45 220 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 RNF212BA8MTL3 300 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 A8MV72 311 aaPredicted RBP10.9□□□□□ -0.66
CPSF3-204ENST00000489403 SCN2BO60939 215 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 IFNA2P01563 188 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 BPGMP07738 259 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 GUSBP08236 651 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 ITGA5P08648 1049 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 NUDT17P0C025 328 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 DHRS4L1P0CG22 281 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 PTAFRP25105 342 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 CD40P25942 277 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 RYKP34925 604 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 ETV4P43268 484 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 SLC16A1P53985 500 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 CHRNEQ04844 493 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 PDCD2Q16342 344 aaPredicted RBP10.9□□□□□ -0.66
CPSF3-204ENST00000489403 GABRA6Q16445 453 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 C6orf52Q5T4I8 152 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 SLC22A25Q6T423 547 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 CLEC2AQ6UVW9 174 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 FRRS1Q6ZNA5 592 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 GRINAQ7Z429 371 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 HMGN2P46Q86SG4 172 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 ANKRD46Q86W74 232 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 CCDC103Q8IW40 242 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 MUC15Q8N387 334 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 OR8J2Q8NGG1 315 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 OR52E4Q8NGH9 312 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 PIGXQ8TBF5 258 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 XAGE5Q8WWM1 108 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 OIT3Q8WWZ8 545 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.9□□□□□ -0.66
CPSF3-204ENST00000489403 RAB8BQ92930 207 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 PPP1R36Q96LQ0 422 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 DHRS9Q9BPW9 319 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 OR11A1Q9GZK7 315 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 SAP130Q9H0E3 1048 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 POLE3Q9NRF9 147 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 ASB6Q9NWX5 421 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 HDGFL3Q9Y3E1 203 aa10.9□□□□□ -0.66
CPSF3-204ENST00000489403 PRAMEF27A3QJZ7 478 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 M0R1B8 84 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 GPR171O14626 319 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ANKRD28O15084 1053 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 DNPH1O43598 174 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ITM2AO43736 263 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 MRPL33O75394 65 aaKnown RBP10.89□□□□□ -0.67
CPSF3-204ENST00000489403 AGR2O95994 175 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 UQCRC2P22695 453 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 PHC1P78364 1004 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 SMU1Q2TAY7 513 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 TMEM249Q2WGJ8 235 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 CHRFAM7AQ494W8 412 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ATAD3BQ5T9A4 648 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 AP1ARQ63HQ0 302 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 SAXO2Q658L1 398 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 KLHL17Q6TDP4 642 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ADGRG3Q86Y34 549 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 FBXL14Q8N1E6 418 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ROPN1LQ96C74 230 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ZG16BQ96DA0 208 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 MUS81Q96NY9 551 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ZIM3Q96PE6 472 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 AKTIPQ9H8T0 292 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 EXOSC3Q9NQT5 275 aaKnown RBP10.89□□□□□ -0.67
CPSF3-204ENST00000489403 PCDHGB4Q9UN71 923 aa10.89□□□□□ -0.67
CPSF3-204ENST00000489403 ELOA3DA6NLF2 546 aaPredicted RBP10.88□□□□□ -0.67
CPSF3-204ENST00000489403 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 H7C417 338 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 PDLIM1O00151 329 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 TYROBPO43914 113 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 CPSF4O95639 269 aaKnown RBP10.88□□□□□ -0.67
CPSF3-204ENST00000489403 C1QCP02747 245 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 CCNA2P20248 432 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 MAGEA8P43361 318 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 KHKP50053 298 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 FABP6P51161 128 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 OR2B6P58173 313 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 KCNJ10P78508 379 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 VLDLRP98155 873 aa10.88□□□□□ -0.67
CPSF3-204ENST00000489403 SLC25A3Q00325 362 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms