RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SLC9A3P48764 834 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 MVKQ03426 396 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 EGR4Q05215 589 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 DNASE1L3Q13609 305 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 TUBA3CQ13748 450 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SSPNQ14714 243 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 COL28A1Q2UY09 1125 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF791Q3KP31 576 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 BCDIN3DQ7Z5W3 292 aaKnown RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 LNX2Q8N448 690 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 NLGN4YQ8NFZ3 816 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 OR10G3Q8NGC4 313 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 OR52L1Q8NGH7 329 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 B4GALNT2Q8NHY0 566 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF563Q8TA94 476 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 GPR119Q8TDV5 335 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 DUSP19Q8WTR2 217 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 LIPHQ8WWY8 451 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 SGTBQ96EQ0 304 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 LRR1Q96L50 414 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF582Q96NG8 517 aaPredicted RBP8.6□□□□□ -1.03
SF3B1-211ENST00000487698 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 LHPPQ9H008 270 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 MCCC2Q9HCC0 563 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF160Q9HCG1 818 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ACOT13Q9NPJ3 140 aa8.6□□□□□ -1.03
SF3B1-211ENST00000487698 ZFHX2Q9C0A1 2572 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 IGLV3-32A0A0A0MS00 114 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 SPAARA0A1B0GVQ0 90 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 KDM4EB2RXH2 506 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 C21orf140B9A014 251 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 MAN1A2O60476 641 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ITGA10O75578 1167 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 OR7A10O76100 309 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 TNFSF15O95150 251 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 FADS2O95864 444 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 HPP00738 406 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ADRA2AP08913 450 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 DBTP11182 482 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 F8A1P23610 371 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 C21orf33P30042 268 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 SOX3P41225 446 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 MAP2K4P45985 399 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 LIMK1P53667 647 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 GP2P55259 537 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 SUMO3P55854 103 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 DLX5P56178 289 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 RPS4XP62701 263 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF91Q05481 1191 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 C17orf67Q0P5P2 114 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ST3GAL4Q11206 333 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 IRF3Q14653 427 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 QPRTQ15274 297 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 TBCEQ15813 527 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 CNPY1Q3B7I2 92 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 BICRALQ6AI39 1079 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 OAFQ86UD1 273 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 OR51A7Q8NH64 312 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 GPR87Q9BY21 358 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 IRF2BPLQ9H1B7 796 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 GALNT9Q9HCQ5 603 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 OSGIN1Q9UJX0 560 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 GPR52Q9Y2T5 361 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 HRH3Q9Y5N1 445 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 CHCHD2Q9Y6H1 151 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ANKUB1A6NFN9 424 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 LRRN3E7EW58 273 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF701M0R085 212 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ETV2O00321 342 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 GMFGO60234 142 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 INMTO95050 263 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 WISP1O95388 367 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 CH25HO95992 272 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 HMGN1P05114 100 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 STSP08842 583 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 BMP7P18075 431 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 DCKP27707 260 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ITPKBP27987 946 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 OTX2P32243 289 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 RPS15P62841 145 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 Q0VFX4 171 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 CHAF1BQ13112 559 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF74Q16587 644 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 SYT6Q5T7P8 510 aaPredicted RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 UBE2UQ5VVX9 321 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 TMEM81Q6P7N7 255 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 LRRC17Q8N6Y2 441 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 TNFRSF13CQ96RJ3 184 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 CDCA4Q9BXL8 241 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 TEX12Q9BXU0 123 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 RYDENQ9NUL5 291 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 FBXL4Q9UKA2 621 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 YARS2Q9Y2Z4 477 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF337Q9Y3M9 751 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 RPL36Q9Y3U8 105 aaKnown RBP8.59□□□□□ -1.03
SF3B1-211ENST00000487698 WIF1Q9Y5W5 379 aa8.59□□□□□ -1.03
SF3B1-211ENST00000487698 FAM186AA6NE01 2351 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 DMXL1Q9Y485 3027 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF99A8MXY4 864 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms