RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CHRNA9Q9UGM1 479 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 ADAM21Q9UKJ8 722 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 SLC35A3Q9Y2D2 325 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 A0A1W2PP18 115 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 OR5H1A6NKK0 313 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 ZNF716A6NP11 495 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 HMGN4O00479 90 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 RGS16O15492 202 aaPredicted RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 IGHV4-39P01824 125 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 LBPP18428 481 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 PTNP21246 168 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 BGNP21810 368 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 S100A3P33764 101 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 KCNJ10P78508 379 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 KRT71Q3SY84 523 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 GPAT3Q53EU6 434 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 FBXW9Q5XUX1 488 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 GRINAQ7Z429 371 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 P2RY8Q86VZ1 359 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 CCDC103Q8IW40 242 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 SLC25A43Q8WUT9 341 aaPredicted RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 OIT3Q8WWZ8 545 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 CNOT9Q92600 299 aaKnown RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 ZBTB9Q96C00 473 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 SLC35A5Q9BS91 424 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 TRAF4Q9BUZ4 470 aaPredicted RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 SLCO5A1Q9H2Y9 848 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 SSU72Q9NP77 194 aaKnown RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 MARCOQ9UEW3 520 aaPredicted RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS16-208ENST00000487461 HAO1Q9UJM8 370 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 GDF2Q9UK05 429 aaPredicted RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 NOSIPQ9Y314 301 aaKnown RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 HDGFL3Q9Y3E1 203 aa10.76□□□□□ -0.69
VPS16-208ENST00000487461 V9GYY5 206 aaPredicted RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 SONP18583 2426 aaKnown RBP10.76□□□□□ -0.69
VPS16-208ENST00000487461 TM9SF1O15321 606 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 CRLF1O75462 422 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 PMS2P2O95744 297 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 CCNA2P20248 432 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 IL12AP29459 219 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 CHI3L1P36222 383 aaPredicted RBP10.75□□□□□ -0.69
VPS16-208ENST00000487461 IDH2P48735 452 aaKnown RBP10.75□□□□□ -0.69
VPS16-208ENST00000487461 CLK1P49759 484 aaKnown RBP10.75□□□□□ -0.69
VPS16-208ENST00000487461 KHKP50053 298 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 FOXG1P55316 489 aaPredicted RBP10.75□□□□□ -0.69
VPS16-208ENST00000487461 NME5P56597 212 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 OR2B6P58173 313 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 UFM1P61960 85 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 STX3Q13277 289 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 ETFDHQ16134 617 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 SYPL1Q16563 259 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 FAM174BQ3ZCQ3 159 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 DNM1P46Q6ZS02 220 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 DTX2Q86UW9 622 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 RNF130Q86XS8 419 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 UBE2J2Q8N2K1 259 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 MREGQ8N565 214 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 ARFGAP2Q8N6H7 521 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 ANKFN1Q8N957 763 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 APH1AQ96BI3 265 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 CCDC115Q96NT0 180 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 INPP5KQ9BT40 448 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 MEAF6Q9HAF1 191 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 EXOSC3Q9NQT5 275 aaKnown RBP10.75□□□□□ -0.69
VPS16-208ENST00000487461 EMC3Q9P0I2 261 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 BTNL2Q9UIR0 455 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 SPIN1Q9Y657 262 aaPredicted RBP10.75□□□□□ -0.69
VPS16-208ENST00000487461 ABCA1O95477 2261 aa10.75□□□□□ -0.69
VPS16-208ENST00000487461 GOLGA8QA0A0J9YX86 632 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 A0A1W2PR80 420 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 CIB4A0PJX0 185 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 TMEM72A0PK05 275 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 GOLGA8OA6NCC3 632 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 CCDC154A6NI56 674 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 CCT8L1PA6NM43 557 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 E7EQL1 145 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 E9PBE3 544 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 GOLGA8NF8WBI6 632 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 AP3D1O14617 1153 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 ABCD4O14678 606 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 RAD51DO75771 328 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 SNUPNO95149 360 aaKnown RBP10.74□□□□□ -0.69
VPS16-208ENST00000487461 CHRM4P08173 479 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 ALDOCP09972 364 aaKnown RBP10.74□□□□□ -0.69
VPS16-208ENST00000487461 FKBP2P26885 142 aaKnown RBP10.74□□□□□ -0.69
VPS16-208ENST00000487461 CDKN2CP42773 168 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 ZNF83P51522 516 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 SLC16A1P53985 500 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 CLNS1AP54105 237 aaKnown RBP10.74□□□□□ -0.69
VPS16-208ENST00000487461 CDH11P55287 796 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 H3F3AP84243 136 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 DPY19L1Q2PZI1 675 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 TNFAIP8L3Q5GJ75 292 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 SSX8Q7RTT4 187 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 LRRC34Q8IZ02 419 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 OR52N5Q8NH56 324 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 PIGXQ8TBF5 258 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms