RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 KITP10721 976 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 IGHV1-2P23083 117 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 EPHA3P29320 983 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 IDH2P48735 452 aaKnown RBP21.71■■□□□ 1.07
LIME1-206ENST00000487026 WDR4P57081 412 aaKnown RBP21.71■■□□□ 1.07
LIME1-206ENST00000487026 HPCAP84074 193 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 ZNF621Q6ZSS3 439 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 ADGRG3Q86Y34 549 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 MGARPQ8TDB4 240 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 SLC25A43Q8WUT9 341 aaPredicted RBP21.71■■□□□ 1.07
LIME1-206ENST00000487026 OR52E6Q96RD3 313 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 SPIN1Q9Y657 262 aaPredicted RBP21.71■■□□□ 1.07
LIME1-206ENST00000487026 CSPG4Q6UVK1 2322 aa21.71■■□□□ 1.07
LIME1-206ENST00000487026 AP3D1O14617 1153 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 CHRM4P08173 479 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 RPS4XP62701 263 aaKnown RBP21.7■■□□□ 1.06
LIME1-206ENST00000487026 COX20Q5RI15 118 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 GRINAQ7Z429 371 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 SPATA19Q7Z5L4 167 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 CCDC103Q8IW40 242 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 KBTBD8Q8NFY9 601 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 PNPT1Q8TCS8 783 aaKnown RBP21.7■■□□□ 1.06
LIME1-206ENST00000487026 OIT3Q8WWZ8 545 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 FBXW5Q969U6 566 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 SLC38A1Q9H2H9 487 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 GPR45Q9Y5Y3 372 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 CADP27708 2225 aa21.7■■□□□ 1.06
LIME1-206ENST00000487026 ZNF716A6NP11 495 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 RAMP1O60894 148 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 PGRP06401 933 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 DANCRP0C864 163 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 NTF4P34130 210 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 PPA1Q15181 289 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 ZNF672Q499Z4 452 aaPredicted RBP21.69■■□□□ 1.06
LIME1-206ENST00000487026 ABLIM2Q6H8Q1 611 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 UBE2J2Q8N2K1 259 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 TRIML2Q8N7C3 387 aa21.69■■□□□ 1.06
LIME1-206ENST00000487026 SMAP2Q8WU79 429 aaPredicted RBP21.69■■□□□ 1.06
LIME1-206ENST00000487026 TRNT1Q96Q11 434 aaKnown RBP21.69■■□□□ 1.06
LIME1-206ENST00000487026 USB1Q9BQ65 265 aaKnown RBP21.69■■□□□ 1.06
LIME1-206ENST00000487026 EXOSC3Q9NQT5 275 aaKnown RBP21.69■■□□□ 1.06
LIME1-206ENST00000487026 IGKV3D-15A0A087WSY6 115 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 TMEM120BA0PK00 339 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 ZNF500O60304 480 aaPredicted RBP21.68■■□□□ 1.06
LIME1-206ENST00000487026 PCSK6P29122 969 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 CDKN1AP38936 164 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 OR2B6P58173 313 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 ZNF433Q8N7K0 673 aaPredicted RBP21.68■■□□□ 1.06
LIME1-206ENST00000487026 MUCL1Q96DR8 90 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 NPAP1Q9NZP6 1156 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 EMC3Q9P0I2 261 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 LIPT1Q9Y234 373 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 NOSIPQ9Y314 301 aaKnown RBP21.68■■□□□ 1.06
LIME1-206ENST00000487026 HDGFL3Q9Y3E1 203 aa21.68■■□□□ 1.06
LIME1-206ENST00000487026 MAGED1Q9Y5V3 778 aaPredicted RBP21.68■■□□□ 1.06
LIME1-206ENST00000487026 ABCA2Q9BZC7 2435 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 TMED7-TICAM2A0A0A6YYA0 188 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 AGAP5A6NIR3 686 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 OVOL3O00110 214 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 HDAC3O15379 428 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 TMCC2O75069 709 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 SNNO75324 88 aaPredicted RBP21.67■■□□□ 1.06
LIME1-206ENST00000487026 PMS2P2O95744 297 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 GGT1P19440 569 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 COX5AP20674 150 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 TNK1Q13470 666 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 PDK3Q15120 406 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 NXNQ6DKJ4 435 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 LRRC74BQ6ZQY2 392 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 ZHX1-C8orf76Q96EF9 292 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 ZBTB18Q99592 522 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 TRIM2Q9C040 744 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 MTHFD2LQ9H903 347 aaPredicted RBP21.67■■□□□ 1.06
LIME1-206ENST00000487026 SLC6A13Q9NSD5 602 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 THAP1Q9NVV9 213 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 TMED7Q9Y3B3 224 aa21.67■■□□□ 1.06
LIME1-206ENST00000487026 TMEM72A0PK05 275 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 NR2F1P10589 423 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 FAPQ12884 760 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 PGGHGQ32M88 737 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 TIMM23BQ5SRD1 257 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 FBXW9Q5XUX1 488 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 CROCCP2Q86T23 111 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 WDR60Q8WVS4 1066 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 GTPBP3Q969Y2 492 aaKnown RBP21.66■■□□□ 1.06
LIME1-206ENST00000487026 APH1AQ96BI3 265 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 OSGIN1Q9UJX0 560 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 JMJD1CQ15652 2540 aa21.66■■□□□ 1.06
LIME1-206ENST00000487026 A0A1W2PP18 115 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 TRPC5OSA6NMA1 111 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 RAD51DO75771 328 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 PGM3O95394 542 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 IMPDH2P12268 514 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 IL7RP16871 459 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 TACR3P29371 465 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 HTR3AP46098 478 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 CLK1P49759 484 aaKnown RBP21.65■■□□□ 1.06
LIME1-206ENST00000487026 FOXG1P55316 489 aaPredicted RBP21.65■■□□□ 1.06
LIME1-206ENST00000487026 DNAJC14Q6Y2X3 702 aaPredicted RBP21.65■■□□□ 1.06
LIME1-206ENST00000487026 MAPK1IP1LQ8NDC0 245 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms