RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 PPA1Q15181 289 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 RNF130Q86XS8 419 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 TRIML2Q8N7C3 387 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 KBTBD8Q8NFY9 601 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 SMAP2Q8WU79 429 aaPredicted RBP22.72■■□□□ 1.23
HLA-F-227ENST00000485513 MUCL1Q96DR8 90 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 TRMT61AQ96FX7 289 aaKnown RBP22.72■■□□□ 1.23
HLA-F-227ENST00000485513 ARL5BQ96KC2 179 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 PANX1Q96RD7 426 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 AIG1Q9NVV5 245 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 HDGFL3Q9Y3E1 203 aa22.72■■□□□ 1.23
HLA-F-227ENST00000485513 CCDC154A6NI56 674 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 OVOL3O00110 214 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 SDHDO14521 159 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 GGT1P19440 569 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 PCSK6P29122 969 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 CLK1P49759 484 aaKnown RBP22.71■■□□□ 1.23
HLA-F-227ENST00000485513 PLAURQ03405 335 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 SYPL1Q16563 259 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 TIMM23BQ5SRD1 257 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 HHATQ5VTY9 493 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 SPATA19Q7Z5L4 167 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 ADGRG3Q86Y34 549 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 CNOT9Q92600 299 aaKnown RBP22.71■■□□□ 1.23
HLA-F-227ENST00000485513 GTPBP3Q969Y2 492 aaKnown RBP22.71■■□□□ 1.23
HLA-F-227ENST00000485513 DNAJA3Q96EY1 480 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 TRNT1Q96Q11 434 aaKnown RBP22.71■■□□□ 1.23
HLA-F-227ENST00000485513 LIPT1Q9Y234 373 aa22.71■■□□□ 1.23
HLA-F-227ENST00000485513 NOSIPQ9Y314 301 aaKnown RBP22.71■■□□□ 1.23
HLA-F-227ENST00000485513 A0A1W2PP18 115 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 ZNF716A6NP11 495 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 DNPH1O43598 174 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 IL12AP29459 219 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 IDH2P48735 452 aaKnown RBP22.7■■□□□ 1.22
HLA-F-227ENST00000485513 ANXA11P50995 505 aaKnown RBP22.7■■□□□ 1.22
HLA-F-227ENST00000485513 TXNL4AP83876 142 aaKnown RBP22.7■■□□□ 1.22
HLA-F-227ENST00000485513 TNK1Q13470 666 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 SSX8Q7RTT4 187 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 CROCCP2Q86T23 111 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 P2RY8Q86VZ1 359 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 ZNF433Q8N7K0 673 aaPredicted RBP22.7■■□□□ 1.22
HLA-F-227ENST00000485513 ANKFN1Q8N957 763 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 ANKRD42Q8N9B4 389 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 PIGXQ8TBF5 258 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 OR52E6Q96RD3 313 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 INPP5KQ9BT40 448 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 TRIM2Q9C040 744 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 OR11A1Q9GZK7 315 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 SLC38A1Q9H2H9 487 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 RAB21Q9UL25 225 aa22.7■■□□□ 1.22
HLA-F-227ENST00000485513 MAGED1Q9Y5V3 778 aaPredicted RBP22.7■■□□□ 1.22
HLA-F-227ENST00000485513 GPR171O14626 319 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 ADAM11O75078 769 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 PGRP06401 933 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 CHRM4P08173 479 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 CCNA2P20248 432 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 HTR3AP46098 478 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 FBXW9Q5XUX1 488 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 DNAJC14Q6Y2X3 702 aaPredicted RBP22.69■■□□□ 1.22
HLA-F-227ENST00000485513 ZNF621Q6ZSS3 439 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 CMIPQ8IY22 773 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 UBE2J2Q8N2K1 259 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 APH1AQ96BI3 265 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 ZBTB18Q99592 522 aa22.69■■□□□ 1.22
HLA-F-227ENST00000485513 AGAP5A6NIR3 686 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 OR5H1A6NKK0 313 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 AP3D1O14617 1153 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 PGM3O95394 542 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 IGHV3-9P01782 118 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 CDKN2CP42773 168 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 OR2B6P58173 313 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 LRRC74AQ0VAA2 488 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 ETFDHQ16134 617 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 CLEC12BQ2HXU8 276 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 LRRC74BQ6ZQY2 392 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 WDR55Q9H6Y2 383 aaPredicted RBP22.68■■□□□ 1.22
HLA-F-227ENST00000485513 TMEM181Q9P2C4 612 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 GPR45Q9Y5Y3 372 aa22.68■■□□□ 1.22
HLA-F-227ENST00000485513 TMED7-TICAM2A0A0A6YYA0 188 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 GOLGA8QA0A0J9YX86 632 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 GOLGA8OA6NCC3 632 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 GOLGA8NF8WBI6 632 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 HDAC3O15379 428 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 RAMP1O60894 148 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 GSNP06396 782 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 EPHA3P29320 983 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 CDKN1AP38936 164 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 SLC16A1P53985 500 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 PPP2R2BQ00005 443 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 FAPQ12884 760 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 VEZF1Q14119 521 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 PGGHGQ32M88 737 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 CCDC103Q8IW40 242 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 WDR60Q8WVS4 1066 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 MTHFD2LQ9H903 347 aaPredicted RBP22.67■■□□□ 1.22
HLA-F-227ENST00000485513 THAP1Q9NVV9 213 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 CISD1Q9NZ45 108 aaKnown RBP22.67■■□□□ 1.22
HLA-F-227ENST00000485513 NPAP1Q9NZP6 1156 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 TRAPPC4Q9Y296 219 aa22.67■■□□□ 1.22
HLA-F-227ENST00000485513 TMED7Q9Y3B3 224 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms