RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 DLL4Q9NR61 685 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 NPIPA5A0A0B4J1W7 369 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 NPIPA7E9PJI5 369 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 PRAMEF26H0Y7S4 382 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 PSMD9O00233 223 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 NPIPA8P0DM63 369 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 RAB3BP20337 219 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 VEGFCP49767 419 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 CLDN12P56749 244 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 STARD6P59095 220 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 TP53I3Q53FA7 332 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 CD276Q5ZPR3 534 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 ZNF793Q6ZN11 406 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 DGLUCYQ7Z3D6 616 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 GDF7Q7Z4P5 450 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 SETD7Q8WTS6 366 aaKnown RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 GHSRQ92847 366 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 RBPMSQ93062 196 aaKnown RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 CNRIP1Q96F85 164 aaPredicted RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 ELMOD3Q96FG2 381 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 CAMK1GQ96NX5 476 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 ERMAPQ96PL5 475 aaPredicted RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 GSX2Q9BZM3 304 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 OR52D1Q9H346 318 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 RCE1Q9Y256 329 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 TRABD2BA6NFA1 517 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 RBMS1P29558 406 aaKnown RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 KIAA1024LP59773 190 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 GSG1Q2KHT4 349 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 GARNL3Q5VVW2 1013 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 ALKAL2Q6UX46 152 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 UBE3DQ7Z6J8 389 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 SLC51BQ86UW2 128 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 OR52L1Q8NGH7 329 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 ACOT11Q8WXI4 607 aaPredicted RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 PINK1Q9BXM7 581 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 TCEAL2Q9H3H9 227 aaPredicted RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 MRPL39Q9NYK5 338 aaKnown RBP13.73□□□□□ -0.21
TTC3-219ENST00000485402 LAMA1P25391 3075 aa13.73□□□□□ -0.21
TTC3-219ENST00000485402 GNB5O14775 395 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 GMDSO60547 372 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 THEGLP0DJG4 465 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 C1orf61Q13536 156 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 ALG11Q2TAA5 492 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 Q6ZTK2 550 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 ARL14Q8N4G2 192 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 YIPF5Q969M3 257 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 SCN2AQ99250 2005 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 ZNF593O00488 134 aaPredicted RBP13.72□□□□□ -0.21
TTC3-219ENST00000485402 HMGN1P05114 100 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 PTBP1P26599 531 aaKnown RBP eCLIP13.72□□□□□ -0.215e-7■□□□□ 8
TTC3-219ENST00000485402 MAGEB1P43366 347 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 PDX1P52945 283 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 TCTE1Q5JU00 501 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 ZNF620Q6ZNG0 422 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 THAP4Q8WY91 577 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 ZNF649Q9BS31 505 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 SLC38A1Q9H2H9 487 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 ZNF69Q9UC07 566 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 A0A0G2JPF8 293 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 A0A1W2PR48 441 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 C7orf66A4D0T2 115 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 HNRNPCL3B7ZW38 293 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 ZNF217O75362 1048 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 TFP02787 698 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 MT-ND5P03915 603 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 HNRNPCL4P0DMR1 293 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 POU3F2P20265 443 aaPredicted RBP13.72□□□□□ -0.21
TTC3-219ENST00000485402 ANXA11P50995 505 aaKnown RBP13.72□□□□□ -0.21
TTC3-219ENST00000485402 HES5Q5TA89 166 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 LCTLQ6UWM7 567 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 SLC22A18ASQ8N1D0 253 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 MOSPD2Q8NHP6 518 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 PFN4Q8NHR9 129 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 DIO2Q92813 273 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 WDR89Q96FK6 387 aaPredicted RBP13.72□□□□□ -0.21
TTC3-219ENST00000485402 LINC00052Q96N35 136 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 SFXN2Q96NB2 322 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 MGAT4CQ9UBM8 478 aa13.72□□□□□ -0.21
TTC3-219ENST00000485402 RPS10-NUDT3A0A1W2PQS6 291 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 LRRN3E7EW58 273 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 ARPC1BO15143 372 aaKnown RBP13.71□□□□□ -0.21
TTC3-219ENST00000485402 APBB3O95704 486 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 ATF1P18846 271 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 ID2Q02363 134 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 RPE65Q16518 533 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 CFAP77Q6ZQR2 320 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 NLRC3Q7RTR2 1065 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 MEIOBQ8N635 442 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 ADAMTS14Q8WXS8 1223 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 LRRN3Q9H3W5 708 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 ACSS1Q9NUB1 689 aaPredicted RBP13.71□□□□□ -0.21
TTC3-219ENST00000485402 IL20Q9NYY1 176 aa13.71□□□□□ -0.21
TTC3-219ENST00000485402 TRAV27A0A087WT01 109 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms