RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 GRINAQ7Z429 371 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 ADGRG3Q86Y34 549 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 CCDC103Q8IW40 242 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-205ENST00000485397 OR52N5Q8NH56 324 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 APH1AQ96BI3 265 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 ZHX1-C8orf76Q96EF9 292 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 ZIM3Q96PE6 472 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 GRIP2Q9C0E4 1043 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 C20orf27Q9GZN8 174 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 SAP130Q9H0E3 1048 aa16.95■□□□□ 0.3
COL27A1-205ENST00000485397 SPIN1Q9Y657 262 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-205ENST00000485397 GOLGA8QA0A0J9YX86 632 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 CIB4A0PJX0 185 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 GOLGA8OA6NCC3 632 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 CCT8L1PA6NM43 557 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 E7EQL1 145 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 GOLGA8NF8WBI6 632 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 CD5LO43866 347 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 SSX4O60224 188 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 PMS2P2O95744 297 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 AGR2O95994 175 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 SERPINE1P05121 402 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 GUSBP08236 651 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 ZNF83P51522 516 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 OR2B6P58173 313 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 ABCE1P61221 599 aaKnown RBP16.94■□□□□ 0.3
COL27A1-205ENST00000485397 KCNJ10P78508 379 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 CHRNEQ04844 493 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 SPOCK1Q08629 439 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 SPANXN4Q5MJ08 99 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 ANXA8L1Q5VT79 327 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 AENQ8WTP8 325 aaKnown RBP16.94■□□□□ 0.3
COL27A1-205ENST00000485397 BARX1Q9HBU1 254 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-205ENST00000485397 POLE3Q9NRF9 147 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 YAE1D1Q9NRH1 226 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 FAIMQ9NVQ4 179 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 HDGFL3Q9Y3E1 203 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 SLC25A15Q9Y619 301 aa16.94■□□□□ 0.3
COL27A1-205ENST00000485397 ANKRD28O15084 1053 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 MYZAPP0CAP1 466 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 IDH2P48735 452 aaKnown RBP16.93■□□□□ 0.3
COL27A1-205ENST00000485397 KHKP50053 298 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 IRX1P78414 480 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-205ENST00000485397 CASP8Q14790 479 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 GPAT3Q53EU6 434 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 AGAP6Q5VW22 663 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 AP1ARQ63HQ0 302 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 SSX8Q7RTT4 187 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 VPS37AQ8NEZ2 397 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 SPATA3Q8NHX4 192 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 PIGXQ8TBF5 258 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 OIT3Q8WWZ8 545 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 CNOT9Q92600 299 aaKnown RBP16.93■□□□□ 0.3
COL27A1-205ENST00000485397 NEURL3Q96EH8 262 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 CACNG6Q9BXT2 260 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-205ENST00000485397 MARCOQ9UEW3 520 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-205ENST00000485397 RAP2CQ9Y3L5 183 aa16.93■□□□□ 0.3
COL27A1-205ENST00000485397 IGHV4-30-2A0A087WSY4 118 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 AP3D1O14617 1153 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 GPR171O14626 319 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 GPRIN2O60269 458 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 MRPL33O75394 65 aaKnown RBP16.92■□□□□ 0.3
COL27A1-205ENST00000485397 CD40P25942 277 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 TTKP33981 857 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 CHI3L1P36222 383 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-205ENST00000485397 RPL14P50914 215 aaKnown RBP16.92■□□□□ 0.3
COL27A1-205ENST00000485397 SLC16A1P53985 500 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 C11orf71Q6IPW1 123 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 SLC22A25Q6T423 547 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 TMEM108Q6UXF1 575 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 B3GLCTQ6Y288 498 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 ARFGAP2Q8N6H7 521 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 ANKFN1Q8N957 763 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 OR52E4Q8NGH9 312 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 TESCQ96BS2 214 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 TRIM44Q96DX7 344 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-205ENST00000485397 RADILQ96JH8 1075 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 SORT1Q99523 831 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 SLC35A5Q9BS91 424 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 C1QTNF6Q9BXI9 259 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 NUF2Q9BZD4 464 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 EXOSC3Q9NQT5 275 aaKnown RBP16.92■□□□□ 0.3
COL27A1-205ENST00000485397 ASB6Q9NWX5 421 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 TAS2R16Q9NYV7 291 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 POU2F3Q9UKI9 436 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 MGAT4BQ9UQ53 548 aa16.92■□□□□ 0.3
COL27A1-205ENST00000485397 TMEM72A0PK05 275 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 M0R1B8 84 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 HMGN4O00479 90 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 TLX2O43763 284 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-205ENST00000485397 ITGA5P08648 1049 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 PTAFRP25105 342 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 CLK1P49759 484 aaKnown RBP16.91■□□□□ 0.3
COL27A1-205ENST00000485397 NUDT6P53370 316 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 NME5P56597 212 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 GABRA6Q16445 453 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 SYPL1Q16563 259 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms