RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 C3orf33Q6P1S2 294 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 R3HCC1LQ7Z5L2 792 aaKnown RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 CCDC103Q8IW40 242 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 VPS37AQ8NEZ2 397 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 MTERF3Q96E29 417 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 DNAJA3Q96EY1 480 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 C1orf159Q96HA4 380 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 SDF2Q99470 211 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 LAT2Q9GZY6 243 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 TUBB1Q9H4B7 451 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 FKRPQ9H9S5 495 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 GPATCH2Q9NW75 528 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 CHCHD3Q9NX63 227 aaKnown RBP6.47□□□□□ -1.37
CSDE1-206ENST00000483030 TAS2R16Q9NYV7 291 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 TBK1Q9UHD2 729 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 ATP6V1HQ9UI12 483 aa6.47□□□□□ -1.37
CSDE1-206ENST00000483030 LOC390937A0A1W2PQ73 354 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ATP6V1G2-DDX39BF2Z307 99 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 PDLIM1O00151 329 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 NDUFS8O00217 210 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 GPR171O14626 319 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 AZIN1O14977 448 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 SCAMP2O15127 329 aaKnown RBP6.46□□□□□ -1.38
CSDE1-206ENST00000483030 WIPF1O43516 503 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 FCMRO60667 390 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 DNAJA2O60884 412 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 CSTAP01040 98 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 PROCP04070 461 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 PGRP06401 933 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 KRT16P08779 473 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ABHD2P08910 425 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 UBTFL6P0CB48 400 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-206ENST00000483030 CPA3P15088 417 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ASMTP46597 345 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 PHC1P78364 1004 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 SKP2Q13309 424 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 LAPTM4AQ15012 233 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 GPR68Q15743 365 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 C11orf91Q3C1V1 193 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 SYT14P1Q58G82 188 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 LIPMQ5VYY2 423 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ABLIM2Q6H8Q1 611 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 OLIG3Q7RTU3 272 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ANKS4BQ8N8V4 417 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 NOA1Q8NC60 698 aaKnown RBP6.46□□□□□ -1.38
CSDE1-206ENST00000483030 OR56A1Q8NGH5 318 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 OR52E4Q8NGH9 312 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 OR5D16Q8NGK9 328 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 MZB1Q8WU39 189 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM234Q8WY98 164 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 OR5P2Q8WZ92 322 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ST8SIA1Q92185 356 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ZHX1-C8orf76Q96EF9 292 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ARL5BQ96KC2 179 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 SORCS2Q96PQ0 1159 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 OR7D2Q96RA2 312 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 VRK1Q99986 396 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-206ENST00000483030 PIMREGQ9BSJ6 248 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 SOX7Q9BT81 388 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 TRMOQ9BU70 441 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 C12orf65Q9H3J6 166 aaKnown RBP6.46□□□□□ -1.38
CSDE1-206ENST00000483030 ACER3Q9NUN7 267 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 OXSMQ9NWU1 459 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 UPB1Q9UBR1 384 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 MALT1Q9UDY8 824 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 KCNE5Q9UJ90 142 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 MKLN1Q9UL63 735 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 MOKQ9UQ07 419 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 TMED5Q9Y3A6 229 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 FKBP7Q9Y680 259 aa6.46□□□□□ -1.38
CSDE1-206ENST00000483030 CENPVL1A0A0U1RR11 272 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 LRP5LA4QPB2 252 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 KLF11O14901 512 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 LSM1O15116 133 aaKnown RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CFLARO15519 480 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 RIPK2O43353 540 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 TCF21O43680 179 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PLIN3O60664 434 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 GLRA3O75311 464 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 URI1O94763 535 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PMS2P2O95744 297 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 C6orf47O95873 294 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CHEK2O96017 543 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 DDX5P17844 614 aaKnown RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PGCP20142 388 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CCNA2P20248 432 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 RYKP34925 604 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 SERPINF1P36955 418 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 HPCAL1P37235 193 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 APOBEC1P41238 236 aaKnown RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 MAGEA8P43361 318 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CCT5P48643 541 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 SLC16A1P53985 500 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 OR2B6P58173 313 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PRPS1P60891 318 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 RPS26P62854 115 aaKnown RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 SLC25A3Q00325 362 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF141Q15928 474 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 LSM12Q3MHD2 195 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms