RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RGS21Q2M5E4 152 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 GPAT3Q53EU6 434 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 ZNF311Q5JNZ3 666 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 ETFRF1Q6IPR1 90 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 HEPHL1Q6MZM0 1159 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CDC73Q6P1J9 531 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 FIGLAQ6QHK4 219 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 KIAA1324Q6UXG2 1013 aaKnown RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 DEF8Q6ZN54 512 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 Q6ZNX1 250 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SLC46A3Q7Z3Q1 461 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 ABI3BPQ7Z7G0 1075 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CACUL1Q86Y37 369 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 PLXDC1Q8IUK5 500 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 MMP21Q8N119 569 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SLC43A2Q8N370 569 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SMRP1Q8NCR6 262 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 OR9Q2Q8NGE9 314 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 DYNC2LI1Q8TCX1 351 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 RAB8BQ92930 207 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SLC35B4Q969S0 331 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CNRIP1Q96F85 164 aaPredicted RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 TMEM80Q96HE8 168 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SH3YL1Q96HL8 342 aaPredicted RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 BMFQ96LC9 184 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 DGAT2Q96PD7 388 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SLC38A2Q96QD8 506 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 OR2A5Q96R48 311 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CSF3RQ99062 836 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 STACQ99469 402 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 ARHGDIGQ99819 225 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 MND1Q9BWT6 205 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SLC5A7Q9GZV3 580 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 PCED1AQ9H1Q7 454 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 OR10A5Q9H207 317 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 KLHL31Q9H511 634 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SLC25A19Q9HC21 320 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 ISYNA1Q9NPH2 558 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 MED17Q9NVC6 651 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CHCHD3Q9NX63 227 aaKnown RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 SPHK1Q9NYA1 384 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 NLGN3Q9NZ94 848 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 APOBEC3BQ9UH17 382 aaKnown RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 OSGIN1Q9UJX0 560 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 FBXW2Q9UKT8 454 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 A4GNTQ9UNA3 340 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CFL2Q9Y281 166 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CAB39Q9Y376 341 aaPredicted RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 PTRH2Q9Y3E5 179 aaKnown RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 SLC22A7Q9Y694 548 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SESN1Q9Y6P5 492 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CCDC187A0A096LP49 1063 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 A0A0J9YVX5 310 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TRBV4-1A0A0J9YWV2 114 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 A0A0J9YY10 115 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 ANTXRLA6NF34 631 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 A8MZ25 164 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 H3BN98 237 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 CCRL2O00421 344 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 B4GALT2O60909 372 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 ZNF217O75362 1048 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 NADKO95544 446 aaPredicted RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 ATP1B1P05026 303 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 HMGN1P05114 100 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 DBIP07108 87 aaKnown RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 UGT2B7P16662 529 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TNFRSF1BP20333 461 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 CERS1P27544 350 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 S100A5P33763 92 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 CNR2P34972 360 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 RGS6P49758 472 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 PRKAG1P54619 331 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 CASP9P55211 416 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TAS2R41P59536 307 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 ZNF45Q02386 682 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 PIGFQ07326 219 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TSPAN31Q12999 210 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 NR1D2Q14995 579 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 SMN1Q16637 294 aaKnown RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 DECR1Q16698 335 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 ARHGAP11BQ3KRB8 267 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 KIAA0895LQ68EN5 471 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 ABLIM2Q6H8Q1 611 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 RPL13AP3Q6NVV1 102 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 ARMC6Q6NXE6 501 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 FBXO42Q6P3S6 717 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TMEM107Q6UX40 140 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 RASSF6Q6ZTQ3 369 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 VN1R4Q7Z5H5 301 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 MRGPREQ86SM8 312 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 RANBP3LQ86VV4 465 aaPredicted RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 RNF113BQ8IZP6 322 aaKnown RBP7.11□□□□□ -1.27
SNX13-208ENST00000482558 OR2L13Q8N349 312 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 CLDN22Q8N7P3 220 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 CDRT4Q8N9R6 151 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 TMEM116Q8NCL8 245 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 PROKR2Q8NFJ6 384 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 B3GNT7Q8NFL0 401 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 OR4K5Q8NGD3 323 aa7.11□□□□□ -1.27
SNX13-208ENST00000482558 OR6Q1Q8NGQ2 317 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms