RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CHMP1BQ7LBR1 199 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 MICU2Q8IYU8 434 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 OR2V1Q8NHB1 315 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 SFXN3Q9BWM7 321 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 MUC13Q9H3R2 512 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 RLIMQ9NVW2 624 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 CHST2Q9Y4C5 530 aa15.8■□□□□ 0.12
PTPN7-209ENST00000477554 IGHV3-15A0A0B4J1V0 119 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 H3BNH8 94 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 GSTA4O15217 222 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 EIF4E2O60573 245 aaKnown RBP15.79■□□□□ 0.12
PTPN7-209ENST00000477554 CIB2O75838 187 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 SMNDC1O75940 238 aaKnown RBP eCLIP15.79■□□□□ 0.12
PTPN7-209ENST00000477554 RPS4Y1P22090 263 aaKnown RBP15.79■□□□□ 0.12
PTPN7-209ENST00000477554 SESN3P58005 492 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 FAM27E3Q08E93 113 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 MYBPHQ13203 477 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 VEZF1Q14119 521 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 SGCBQ16585 318 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 TMEM176BQ3YBM2 270 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-209ENST00000477554 INTS11Q5TA45 600 aaKnown RBP15.79■□□□□ 0.12
PTPN7-209ENST00000477554 HBMQ6B0K9 141 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 C22orf34Q6ZV56 151 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 VRK2Q86Y07 508 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 PTOV1Q86YD1 416 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 OSTF1Q92882 214 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 ASB9Q96DX5 294 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 DTNBP1Q96EV8 351 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 C14orf79Q96F83 325 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 KLHL15Q96M94 604 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 TRNT1Q96Q11 434 aaKnown RBP15.79■□□□□ 0.12
PTPN7-209ENST00000477554 RBM24Q9BX46 236 aaKnown RBP15.79■□□□□ 0.12
PTPN7-209ENST00000477554 CALML5Q9NZT1 146 aa15.79■□□□□ 0.12
PTPN7-209ENST00000477554 AGAP5A6NIR3 686 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 A8MXE2 369 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 C5orf58C9J3I9 102 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 LINC01387J3KSC0 135 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 BCHEP06276 602 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 TFPTP0C1Z6 253 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 NR2F1P10589 423 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 CCKARP32238 428 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 PCGF2P35227 344 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 SUMO3P55854 103 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-209ENST00000477554 KCNJ10P78508 379 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 CDK6Q00534 326 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 TRAP1Q12931 704 aaKnown RBP15.78■□□□□ 0.12
PTPN7-209ENST00000477554 CBFBQ13951 182 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 SCARB2Q14108 478 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 FXNQ16595 210 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 SLC25A53Q5H9E4 307 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 EIF3MQ7L2H7 374 aaKnown RBP15.78■□□□□ 0.12
PTPN7-209ENST00000477554 FAM156AQ8NDB6 213 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 HIPK4Q8NE63 616 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 SLC38A5Q8WUX1 472 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 UTP4Q969X6 686 aaKnown RBP15.78■□□□□ 0.12
PTPN7-209ENST00000477554 CCDC124Q96CT7 223 aaKnown RBP15.78■□□□□ 0.12
PTPN7-209ENST00000477554 LIME1Q9H400 295 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 MCCC2Q9HCC0 563 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 DNAJB12Q9NXW2 375 aaKnown RBP15.78■□□□□ 0.12
PTPN7-209ENST00000477554 SLC7A8Q9UHI5 535 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 MAGEL2Q9UJ55 1249 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 ANGPT4Q9Y264 503 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 CELSR1Q9NYQ6 3014 aa15.78■□□□□ 0.12
PTPN7-209ENST00000477554 ANKHD1Q8IWZ3 2542 aaKnown RBP15.78■□□□□ 0.12
PTPN7-209ENST00000477554 VPS13CQ709C8 3753 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ETV2O00321 342 aaPredicted RBP15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ENPP1P22413 925 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 SSTR2P30874 369 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 KIR2DL3P43628 341 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 CRISP3P54108 245 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 HPCAP84074 193 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 PRAMEF8Q5VWM4 474 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 PRAMEF7Q5VXH5 474 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 REEP3Q6NUK4 255 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 LRRC74BQ6ZQY2 392 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 COMTD1Q86VU5 262 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF610Q8N9Z0 462 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 TOR1AIP2Q8NFQ8 470 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ABHD3Q8WU67 409 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 TMEM19Q96HH6 336 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ZFP3Q96NJ6 502 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF559Q9BR84 538 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 POLE3Q9NRF9 147 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 GMPR2Q9P2T1 348 aaKnown RBP15.77■□□□□ 0.12
PTPN7-209ENST00000477554 EGFL7Q9UHF1 273 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 USP22Q9UPT9 525 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 POMPQ9Y244 141 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ZNF175Q9Y473 711 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 SNX13Q9Y5W8 968 aa15.77■□□□□ 0.12
PTPN7-209ENST00000477554 GPC6Q9Y625 555 aaPredicted RBP15.77■□□□□ 0.12
PTPN7-209ENST00000477554 ANKRD65E5RJM6 399 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 GUSBP08236 651 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 GKN3PP0CG01 181 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 GGT1P19440 569 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 EDNRAP25101 427 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 MSX2P35548 267 aaPredicted RBP15.77■□□□□ 0.11
PTPN7-209ENST00000477554 RPS3AP61247 264 aaKnown RBP15.77■□□□□ 0.11
PTPN7-209ENST00000477554 ZNF239Q16600 458 aaKnown RBP15.77■□□□□ 0.11
PTPN7-209ENST00000477554 MRPL2Q5T653 305 aaKnown RBP15.77■□□□□ 0.11
PTPN7-209ENST00000477554 GLYATQ6IB77 296 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms