RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 C5orf58C9J3I9 102 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ARPC3O15145 178 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 NARSO43776 548 aaKnown RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 BANF1O75531 89 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 UPK3AO75631 287 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CNMDO75829 334 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 BCL10O95999 233 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ARG1P05089 322 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 UROSP10746 265 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 SHC1P29353 583 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 DCTDP32321 178 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 GP2P55259 537 aaKnown RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 RRAS2P62070 204 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF200P98182 395 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CDK6Q00534 326 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PDZK1IP1Q13113 114 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 TUBB3Q13509 450 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PRTGQ2VWP7 1150 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PHYHD1Q5SRE7 291 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 MORN1Q5T089 497 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PHF19Q5T6S3 580 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 OVOS1Q6IE37 1185 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 LAIR2Q6ISS4 152 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF720Q7Z2F6 126 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 NRARPQ7Z6K4 114 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 NRROSQ86YC3 692 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 SKA3Q8IX90 412 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 DAW1Q8N136 415 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 OR4S2Q8NH73 311 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 OCC1Q8TAD7 63 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 RAB2BQ8WUD1 216 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 YIPF6Q96EC8 236 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 OXNAD1Q96HP4 312 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 EML4Q9HC35 981 aaKnown RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 LYRM4Q9HD34 91 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ELOVL5Q9NYP7 299 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 RAPGEFL1Q9UHV5 662 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 SIP14410 1827 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 DOCK5Q9H7D0 1870 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PAPSS1O43252 624 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CILPO75339 1184 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 LEFTY1O75610 366 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PDE9AO76083 593 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 KDM4BO94953 1096 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 AP2A1O95782 977 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CFIP05156 583 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 HOXB5P09067 269 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ANXA4P09525 319 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 IRF1P10914 325 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 HOXA5P20719 270 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 FRKP42685 505 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 GTF2H2Q13888 395 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 SPDYE7PQ495Y7 208 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 GTF2H2CQ6P1K8 395 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PNCKQ6P2M8 343 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CCDC190Q86UF4 302 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 NAA40Q86UY6 237 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 DTX1Q86Y01 620 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 HPSE2Q8WWQ2 592 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 RSRP1Q9BUV0 290 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 SMG9Q9H0W8 520 aaKnown RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PORCNQ9H237 461 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 NDRG4Q9ULP0 352 aaKnown RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 BAIAP2Q9UQB8 552 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 SLC17A4Q9Y2C5 497 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 AP4S1Q9Y587 144 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 LIPGQ9Y5X9 500 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF638Q14966 1978 aaKnown RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 AGAP5A6NIR3 686 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 KIAA0513O60268 411 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CALCAP01258 141 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 AMBPP02760 352 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 OSMP13725 252 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CTSEP14091 401 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 RAB3BP20337 219 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CCNOP22674 350 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PBX3P40426 434 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 IL2P60568 153 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 AGBL4Q5VU57 503 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 METRNLQ641Q3 311 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ABLIM2Q6H8Q1 611 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 LINGO4Q6UY18 593 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 FRMD7Q6ZUT3 714 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CRLF3Q8IUI8 442 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM86AQ8N2M4 240 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 PQLC1Q8N2U9 271 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 LRRC52Q8N7C0 313 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ST6GALNAC3Q8NDV1 305 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF564Q8TBZ8 553 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM174Q8WUU8 243 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 NEU4Q8WWR8 484 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 S100PBPQ96BU1 408 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 RSG1Q9BU20 258 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 BEX2Q9BXY8 128 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 SLC29A3Q9BZD2 475 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ATXN3LQ9H3M9 355 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 ASAH2Q9NR71 780 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 KCNK6Q9Y257 313 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms