RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MATKP42679 507 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 UQCRFS1P47985 274 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CRYBA4P53673 196 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CDC42P60953 191 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 FAM3AP98173 230 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SRSF6Q13247 344 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ARHGEF7Q14155 803 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TRIP10Q15642 601 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 KIF19Q2TAC6 998 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ZBED5Q49AG3 693 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 OR2B11Q5JQS5 317 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CATSPEREQ5SY80 951 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SUSD4Q5VX71 490 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM225Q6GV28 225 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 LPCAT3Q6P1A2 487 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 NIPAL3Q6P499 406 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 KCNIP4Q6PIL6 250 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SPNS3Q6ZMD2 512 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ACOT7LQ6ZUV0 252 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 APTXQ7Z2E3 356 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ADIPOR2Q86V24 386 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 PQLC1Q8N2U9 271 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SVOPLQ8N434 492 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 NANOGP1Q8N7R0 232 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CDYL2Q8N8U2 506 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 EXD3Q8N9H8 876 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 HJURPQ8NCD3 748 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM161BQ8NDZ6 487 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SPATA3Q8NHX4 192 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 WIPF2Q8TF74 440 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SCAMP4Q969E2 229 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TMEM203Q969S6 136 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ANKRD9Q96BM1 317 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 BIRC8Q96P09 236 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TNFRSF13CQ96RJ3 184 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TSNAXQ99598 290 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 MED18Q9BUE0 208 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 TRAF4Q9BUZ4 470 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SLC25A32Q9H2D1 315 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 NT5DC2Q9H857 520 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 RAB18Q9NP72 206 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 RAB9BQ9NP90 201 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 C1GALT1Q9NS00 363 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ACSS1Q9NUB1 689 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 PEMTQ9UBM1 199 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 COPS7AQ9UBW8 275 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ZDHHC2Q9UIJ5 367 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 EMCNQ9ULC0 261 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 ZNF490Q9ULM2 529 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 CLIC4Q9Y696 253 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 COL4A1P02462 1669 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 SHROOM3Q8TF72 1996 aa5.59□□□□□ -1.51
SMARCE1-208ENST00000474246 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 A0A1B0GTI1 187 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 CCT8L1PA6NM43 557 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 TSTD3H0UI37 97 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 TMX2-CTNND1H3BSU7 103 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC16A4O15374 487 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 TEX33O43247 280 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 LAMTOR5O43504 91 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 KLRC4O43908 158 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 FZD7O75084 574 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF806P0C7X5 589 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SPATA31C1P0DKV0 1188 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 B4GALT1P15291 398 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 BMP5P22003 454 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 STOMP27105 288 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC6A1P30531 599 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 HIBADHP31937 336 aaKnown RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SERPINB10P48595 397 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 PPIAP62937 165 aaKnown RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 LCN2P80188 198 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 EGR4Q05215 589 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 ACSM2AQ08AH3 577 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF169Q14929 603 aaPredicted RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 DLG2Q15700 870 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 TNXAQ16473 311 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 WASHC2DQ5SRD0 308 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 ACSM2BQ68CK6 577 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 ACSM6Q6P461 480 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM159AQ6UWV7 190 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 DET1Q7L5Y6 550 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 ZDHHC13Q8IUH4 622 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 TRAPPC5Q8IUR0 188 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 LAS2Q8IYD9 372 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SYS1Q8N2H4 156 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 C2orf73Q8N5S3 287 aaPredicted RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 CLDN22Q8N7P3 220 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 OR8J3Q8NGG0 315 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 FBLIM1Q8WUP2 373 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 NUDCD2Q8WVJ2 157 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 PTH2Q96A98 100 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 C12orf43Q96C57 262 aaKnown RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SH3YL1Q96HL8 342 aaPredicted RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SPATA33Q96N06 139 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 MAP1LC3CQ9BXW4 147 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 WNT10AQ9GZT5 417 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 CDIP1Q9H305 208 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms