RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RGS1Q08116 209 aa19.48■□□□□ 0.71
COL18A1-207ENST00000473212 LGALSLQ3ZCW2 172 aaPredicted RBP19.48■□□□□ 0.71
COL18A1-207ENST00000473212 TMPRSS11FQ6ZWK6 438 aa19.48■□□□□ 0.71
COL18A1-207ENST00000473212 FLVCR1-AS1Q8TAF5 88 aa19.48■□□□□ 0.71
COL18A1-207ENST00000473212 HAVCR2Q8TDQ0 301 aa19.48■□□□□ 0.71
COL18A1-207ENST00000473212 PATE1Q8WXA2 126 aa19.48■□□□□ 0.71
COL18A1-207ENST00000473212 OR2A5Q96R48 311 aa19.48■□□□□ 0.71
COL18A1-207ENST00000473212 MED31Q9Y3C7 131 aa19.48■□□□□ 0.71
COL18A1-207ENST00000473212 ALPK2Q86TB3 2170 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 LRRN3E7EW58 273 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 STX11O75558 287 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 PITPNAQ00169 270 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 CAMK2DQ13557 499 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 AMZ1Q400G9 498 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 RPL13AP3Q6NVV1 102 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 ENPP7Q6UWV6 458 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 MS4A15Q8N5U1 240 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 THAP4Q8WY91 577 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 ORAI1Q96D31 301 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 SORCS2Q96PQ0 1159 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 LRRN3Q9H3W5 708 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 SRMSQ9H3Y6 488 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 STARD5Q9NSY2 213 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 COPZ2Q9P299 210 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 LOC105371267A0A1B0GV96 52 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 TRABD2BA6NFA1 517 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 IMPA2O14732 288 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 SSNA1O43805 119 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 NGFRP08138 427 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 PEPDP12955 493 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 ZNF3P17036 446 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 RPS4Y1P22090 263 aaKnown RBP19.47■□□□□ 0.71
COL18A1-207ENST00000473212 ZNF81P51508 661 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 TFF2Q03403 129 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 PIAS4Q8N2W9 510 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-207ENST00000473212 TEX19Q8NA77 164 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 TMEM168Q9H0V1 697 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 KIR3DX1Q9H7L2 352 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 AUNIPQ9H7T9 357 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 WSB2Q9NYS7 404 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-207ENST00000473212 AK6Q9Y3D8 172 aaKnown RBP19.47■□□□□ 0.71
COL18A1-207ENST00000473212 LAMA1P25391 3075 aa19.47■□□□□ 0.71
COL18A1-207ENST00000473212 CACNA1IQ9P0X4 2223 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 SLC35G6P0C7Q6 338 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 ADPRHP54922 357 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 SNTB2Q13425 540 aaKnown RBP19.46■□□□□ 0.71
COL18A1-207ENST00000473212 COL28A1Q2UY09 1125 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 DGAT2L6Q6ZPD8 337 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 CNOT9Q92600 299 aaKnown RBP19.46■□□□□ 0.71
COL18A1-207ENST00000473212 NKIRAS2Q9NYR9 191 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 MRPL15Q9P015 296 aaKnown RBP19.46■□□□□ 0.71
COL18A1-207ENST00000473212 MEIKINA0A087WXM9 373 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 ZNF593O00488 134 aaPredicted RBP19.46■□□□□ 0.71
COL18A1-207ENST00000473212 FLRT2O43155 660 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 SCO1O75880 301 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 SULT1A3P0DMM9 295 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 SULT1A4P0DMN0 295 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 NT5EP21589 574 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 DNASE1P24855 282 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 PRRT3Q5FWE3 981 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 FHL5Q5TD97 284 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 BTN2A1Q7KYR7 527 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 COX18Q8N8Q8 333 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 HGDQ93099 445 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 ZMYND19Q96E35 227 aaPredicted RBP19.46■□□□□ 0.71
COL18A1-207ENST00000473212 TNFRSF13CQ96RJ3 184 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 CDCP1Q9H5V8 836 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 DLL4Q9NR61 685 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 PTTG3PQ9NZH4 202 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 ABRACLQ9P1F3 81 aa19.46■□□□□ 0.71
COL18A1-207ENST00000473212 TP53BP1Q12888 1972 aaPredicted RBP19.45■□□□□ 0.7
COL18A1-207ENST00000473212 TRAV1-2A0A0B4J238 106 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 PTP4A3O75365 173 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 ADH1BP00325 375 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 PDGFAP04085 211 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 CA3P07451 260 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 ZSWIM7Q19AV6 140 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 FCRL6Q6DN72 434 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 RPLP0P6Q8NHW5 317 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 OR2M4Q96R27 311 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 OR6C2Q9NZP2 312 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 FLRT3Q9NZU0 649 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 CIB4A0PJX0 185 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 HCRTR1O43613 425 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 MPC2O95563 127 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 HPXP02790 462 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 CTSBP07858 339 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 ATXN8OSP0DMR3 200 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 ACTR1BP42025 376 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 LSSP48449 732 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 GDI2P50395 445 aaKnown RBP19.45■□□□□ 0.7
COL18A1-207ENST00000473212 ACTR1AP61163 376 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 RPS15AP62244 130 aaKnown RBP19.45■□□□□ 0.7
COL18A1-207ENST00000473212 SNTA1Q13424 505 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 KLF9Q13886 244 aaPredicted RBP19.45■□□□□ 0.7
COL18A1-207ENST00000473212 GXYLT1Q4G148 440 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 FRMD1Q8N878 549 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 CLIP3Q96DZ5 547 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 CCDC120Q96HB5 630 aa19.45■□□□□ 0.7
COL18A1-207ENST00000473212 SPRTNQ9H040 489 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms