RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 PRPHP41219 470 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 MAP3K8P41279 467 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 GRIA1P42261 906 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 HNMTP50135 292 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ARFIP1P53367 373 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 RPS8P62241 208 aaKnown RBP2.65□□□□□ -1.99
PTCD3-209ENST00000472044 KLRC3Q07444 240 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ORC2Q13416 577 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-209ENST00000472044 GPM6BQ13491 265 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 RIPK1Q13546 671 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ARL6IP1Q15041 203 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 SLC15A2Q16348 729 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 EXOC3L2Q2M3D2 409 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 TRIM16LQ309B1 348 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 LRRC23Q53EV4 343 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-209ENST00000472044 C1orf220Q5T0J3 134 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 TPGS2Q68CL5 300 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 C11orf71Q6IPW1 123 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 KCNIP4Q6PIL6 250 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ARCQ7LC44 396 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 CCDC50Q8IVM0 306 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 TMEM123Q8N131 208 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 TMEM252Q8N6L7 170 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 OR2L5Q8NG80 312 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 DNAJA4Q8WW22 397 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-209ENST00000472044 HTR3CQ8WXA8 447 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 NUS1Q96E22 293 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 PGLYRP4Q96LB8 373 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 IMMP1LQ96LU5 166 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 PLEKHF1Q96S99 279 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ARHGDIGQ99819 225 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 LRRN3Q9H3W5 708 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 GORASP2Q9H8Y8 452 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 SH2D2AQ9NP31 389 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ANAPC11Q9NYG5 84 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 EXTL2Q9UBQ6 330 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 LCMT1Q9UIC8 334 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 TMCC3Q9ULS5 477 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 A0A0G2JRQ6 117 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 VSTM2BA6NLU5 285 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 GPR89AB7ZAQ6 455 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 PRKAB2O43741 272 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 MMP23AO75900 390 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 SCGNO76038 276 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 IGLV1-47P01700 117 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 ALOX5P09917 674 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 GPR89BP0CG08 455 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 CASP4P49662 377 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 EFNB2P52799 333 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 GBX2P52951 348 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-209ENST00000472044 GNB2P62879 340 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 PDK3Q15120 406 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 IL17AQ16552 155 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 DPYSL2Q16555 572 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 SFT2D3Q587I9 215 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 Q6ZPB1 254 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-209ENST00000472044 CCDC80Q76M96 950 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 FAM220AQ7Z4H9 259 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 TGIF2LYQ8IUE0 185 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 ERI1Q8IV48 349 aaKnown RBP2.64□□□□□ -1.99
PTCD3-209ENST00000472044 VSTM4Q8IW00 320 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 OR2L13Q8N349 312 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 ALLCQ8N6M5 410 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 SLC41A3Q96GZ6 507 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 GAL3ST1Q99999 423 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 EBF4Q9BQW3 602 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 PARD6BQ9BYG5 372 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 RAB34Q9BZG1 259 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 SELENOIQ9C0D9 397 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 MAGT1Q9H0U3 335 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 OR51J1Q9H342 316 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 POPDC2Q9HBU9 364 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 RAB18Q9NP72 206 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 BTNL2Q9UIR0 455 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 NAP1L2Q9ULW6 460 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-209ENST00000472044 PRPF19Q9UMS4 504 aaKnown RBP2.64□□□□□ -1.99
PTCD3-209ENST00000472044 CELA1Q9UNI1 258 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 UGT2A1Q9Y4X1 527 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 SH3TC1Q8TE82 1336 aa2.64□□□□□ -1.99
PTCD3-209ENST00000472044 TRAV26-1A0A087WT03 109 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 A0A1B0GUS0 222 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 IDSB3KWA1 339 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 EMC8O43402 210 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 AP2A1O95782 977 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 HSMCR30P0CW71 290 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 RFC4P35249 363 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 CRYBB1P53674 252 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-209ENST00000472044 BIDP55957 195 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 WNT4P56705 351 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 RIPK4P57078 832 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 CHIT1Q13231 466 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 IL34Q6ZMJ4 242 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 VRK2Q86Y07 508 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 TBC1D21Q8IYX1 336 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 ATP6V0D2Q8N8Y2 350 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 TRPV1Q8NER1 839 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 OR52I1Q8NGK6 324 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 FBXO30Q8TB52 745 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 CHCHD10Q8WYQ3 142 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-209ENST00000472044 ST8SIA1Q92185 356 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms