RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RRP15Q9Y3B9 282 aaKnown RBP8.16□□□□□ -1.1
SF3A1-206ENST00000471037 WDR45Q9Y484 360 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 OR10H1Q9Y4A9 318 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 WIF1Q9Y5W5 379 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 KCNE3Q9Y6H6 103 aa8.16□□□□□ -1.1
SF3A1-206ENST00000471037 MED12Q93074 2177 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 DSPPQ9NZW4 1301 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 A0A0G2JPF8 293 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 GXYLT2A0PJZ3 443 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 HNRNPCL2B2RXH8 293 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 HNRNPCL3B7ZW38 293 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 SERPINB7O75635 380 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 KCNK2O95069 426 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 H6PDO95479 791 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 CHRM4P08173 479 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 HNRNPCL4P0DMR1 293 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 ETS2P15036 469 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 NCK1P16333 377 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 ATP6V1B2P21281 511 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 ATP6V1C1P21283 382 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 LOXP28300 417 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 LCN1P31025 176 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 KDELR2P33947 212 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 PSMD4P55036 377 aaKnown RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 ACTR3P61158 418 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 DMTNQ08495 405 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 FAM27E3Q08E93 113 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 MAPK11Q15759 364 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 DECR1Q16698 335 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 LRRC23Q53EV4 343 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 AP1ARQ63HQ0 302 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 VWA1Q6PCB0 445 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF474Q6S9Z5 364 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF619Q8N2I2 560 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 BHLHE22Q8NFJ8 381 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 FAM110BQ8TC76 370 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 WDR60Q8WVS4 1066 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 OIT3Q8WWZ8 545 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 TMBIM1Q969X1 311 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 COL21A1Q96P44 957 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 CCL19Q99731 98 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 SPATA5L1Q9BVQ7 753 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 GSX2Q9BZM3 304 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 SAP130Q9H0E3 1048 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 SLC38A1Q9H2H9 487 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 DENND2DQ9H6A0 471 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 CACYBPQ9HB71 228 aaKnown RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 KLHL28Q9NXS3 571 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 ELOVL5Q9NYP7 299 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 RPS6KA6Q9UK32 745 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 FBXL2Q9UKC9 423 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 SAMD4AQ9UPU9 718 aaKnown RBP8.15□□□□□ -1.1
SF3A1-206ENST00000471037 JMJD1CQ15652 2540 aa8.15□□□□□ -1.1
SF3A1-206ENST00000471037 RAI1Q7Z5J4 1906 aaPredicted RBP8.15□□□□□ -1.11
SF3A1-206ENST00000471037 MED12LQ86YW9 2145 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 TCRBV3S1A0A5B6 114 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 TRIM64A6NGJ6 449 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 TRIM64BA6NI03 449 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 SLC22A20A6NK97 555 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 B4DXG7 233 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 M0QX08 132 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 KIAA0513O60268 411 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 ZIC3O60481 467 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 TSPAN2O60636 221 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 REM1O75628 298 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 SMNDC1O75940 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 IL33O95760 270 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 SERPINA1P01009 418 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 CGAP01215 116 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 C8BP07358 591 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 CD8BP10966 210 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 UMPSP11172 480 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 PEPDP12955 493 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 PAX1P15863 534 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 HOXB6P17509 224 aaKnown RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 DPP4P27487 766 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 PCSK6P29122 969 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 AQP1P29972 269 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 KRT20P35900 424 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 UGT2B10P36537 528 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 KIR2DL2P43627 348 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 GAS1P54826 345 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 B3GALT5-AS1P59052 145 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 CCNIQ14094 377 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 EFR3AQ14156 821 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 RPS26P11Q5JNZ5 115 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 TYW3Q6IPR3 259 aaKnown RBP8.14□□□□□ -1.11
SF3A1-206ENST00000471037 FIGNL1Q6PIW4 674 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 CYP2R1Q6VVX0 501 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 FRRS1Q6ZNA5 592 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 SPATA24Q86W54 205 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 PEX5LQ8IYB4 626 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 OR4N2Q8NGD1 307 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 SPATA3Q8NHX4 192 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 SLC26A7Q8TE54 656 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 RASSF5Q8WWW0 418 aa8.14□□□□□ -1.11
SF3A1-206ENST00000471037 IGFBPL1Q8WX77 278 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms